Coregonus clupeaformis (lake whitefish): 121576882
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Entry
121576882 CDS
T08357
Name
(RefSeq) TBC1 domain family member 15-like
KO
K20168
TBC1 domain family member 15
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121576882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121576882
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121576882
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH_RBD
Motif
Other DBs
NCBI-GeneID:
121576882
NCBI-ProteinID:
XP_041746363
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MAADTPPKVLFEHEGVFIHSNEDSEEQDLLVSGFLRLIDKDGETIVEYKPLEDTVDPSNM
LCAGKDSSSVMEWAQCPGEERSTPQQAVVVEQQSYETEWDMINAVSFPKRKPCCNGEGAL
NNTHEKSKWAFTFSVWDLRSITVKEEGWSRLVFRLKEPPTSLPALHFHQGGSEGFLDCLR
RYALITEAPDDETCLLVSTPNRALSQSFENLLDDNNYGLVTKLKNDPYTTTLGGFSKVTN
YIFDAFRGPELEQQQRPPEEVADLDILGLGEVIPGLEINQQEEPGFEVITRIDLGARPEV
TRRQPLSAEDWAENQEKEGRMKNVPRLKKIIFKGGLCHAVRKEAWKFLLGYFPWDSTYEE
RKGLQRRKTDEYFRMKLQWKSVSEEQERRNSRLRDFRSLIEKDVNRTDRTNRFYEGIDNP
GLVLLHDILMTYCMYDFDLGYVQGMSDLLSPILYVMENEVDAFWCFVSFMDQMHQNFEEQ
MQGMKTQLIQLSTLLRLLDLSFWNYLESQDSGYLYFCFRWLLIRFKRELSFPDVLRMWEV
IWTGLPCQNFHLLVCCAILDSEKLKIMEENYGFNEILKHINELSMKLDIEEILHKSEAIC
MQIRSCKDLPHSIIEILGFNTESELPRLEGRVFGTPLDSPQSPRPTQRQEVFSNGHNGHY
REPPS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgatactcctcccaaggtgttatttgaacatgaaggtgttttcatacactca
aacgaagacagtgaagagcaagatctacttgtttctgggttcctacggctcattgataag
gatggtgaaactatcgtggaatacaaacccttggaggacactgttgatccatctaacatg
ctgtgtgctggcaaggattccagctcagtgatggagtgggcccagtgtcccggggaggag
aggtcgactcctcagcaagctgtggtggtggagcagcagagctacgagactgagtgggac
atgatcaatgcagtctcctttcccaagaggaaaccctgctgcaacggagagggtgcattg
aacaacacacatgagaaaagcaagtgggctttcaccttcagtgtgtgggacctgaggtct
atcacagtgaaggaggagggctggtcccgcctggtgttcagactgaaggagccccccacc
tccctgccagccctccacttccaccaagggggtagtgaaggcttcctggactgcctgagg
agatacgccttgatcactgaggccccggatgatgaaacctgcctgctggtcagcactccc
aacagagctctctctcagtccttcgagaaccttctggatgacaacaactacggccttgtt
actaagctgaagaatgatccgtacacgacgaccctggggggcttctccaaggtcaccaac
tacatcttcgatgcgttccgtggcccagagctggaacagcagcagcgccccccggaggag
gtggctgacctggacatccttggactgggagaggtcatccctggcctggagatcaaccag
caggaggagccgggcttcgaggtcatcaccaggatcgacctgggagccaggccagaggta
acgaggaggcagccactgtctgcagaggactgggctgagaaccaggagaaggaaggaagg
atgaaaaatgtccctcgccttaagaaaatcatattcaaagggggtttgtgccatgcggtg
aggaaagaggcctggaagtttctgctggggtatttcccctgggacagcacctacgaggag
aggaaaggcctacagaggaggaaaacggatgagtacttcaggatgaagctccagtggaag
tcggtgagtgaggagcaggagaggaggaactccaggttaagagacttcaggagcctgata
gagaaggatgtgaacagaacagaccgaaccaacaggttctatgagggcatagacaaccca
ggcctggtgttactccatgacatcctgatgacgtattgcatgtatgattttgatctgggg
tatgtccagggaatgagcgacctcctctccccgattctctatgtgatggagaacgaggtg
gatgccttctggtgttttgtctccttcatggatcaaatgcaccagaactttgaggagcag
atgcaaggcatgaagactcaactgatccagctcagcactctgttgaggctgcttgacctg
tccttctggaactacctcgagtcgcaggattcaggttacctgtatttctgtttccggtgg
ttactgatccgcttcaagagggagctcagttttccagatgttcttcgtatgtgggaggtc
atatggactggcttgccctgccaaaacttccatttgctggtgtgctgtgccatcctagac
tcagagaaactgaaaatcatggaggaaaactatggcttcaatgagatcctcaagcacatc
aatgaactctcaatgaaactggacattgaagaaatccttcacaaatcagaggctatttgt
atgcagatcagaagttgtaaggatttgcctcattcaataattgagatcctgggattcaac
acagaaagcgaacttcccagattagaagggcgggtgtttgggactcctcttgattctcct
cagtctcccagacccacacagaggcaggaggtcttctctaatggtcacaatggacattac
agagaacccccctcataa
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