Coregonus clupeaformis (lake whitefish): 121576891
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Entry
121576891 CDS
T08357
Name
(RefSeq) iroquois-class homeodomain protein IRX-5-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121576891
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121576891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
121576891
NCBI-ProteinID:
XP_041746374
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MAYPQGFLFQPSVSLALHSCPPFSSSVILGGPRTEDLGRSSSGSAFAPYAGSPAFNGSSP
GFNSHLQYRGEQRAALNSFVGSAYDPSAGIAGSLEYHPFGVALGYPYGDPTYRKNATRDA
TATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNR
SEDEEEDDNIDLEKNDEDEPLKPTAEIGSKNEAVGQHPNPVGIPCEKYKEDNSGNDMEPV
LTDPDIKDHGDRRVTEMPPPTTAASPQNADLGAERDSDSAASESPPPPRRNDSGNSSNAT
SVIHSALPAQKPKLWSLAEIATSSDKCKGCSDASQTMPGQLRTEIPGRRPMSSPLRDAPQ
NLFPHSAALSRHVYYTSPFFQGYSNYHGTFGDLQSPGSNVGSATHLNGLHQTMLHRAEAL
SRDSQARSQTQIDICKDLRFEIKKGMTHV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcctatcctcaaggctttctcttccaaccgtcggtgtctctggctctccattcctgt
cccccgttcagttccagtgtgattttaggaggaccaaggacagaggacctgggccggtcg
tcttcaggttcagccttcgcgccgtacgcgggatcaccggcgttcaatggttcatcccct
ggcttcaattcccacctccagtatcgcggagagcagagggcggcactgaactcatttgtg
ggctccgcgtatgatccttcagcgggcatcgctggctctttagaatatcacccgtttggt
gtagcattgggctatccatatggagaccctacatacaggaaaaatgctacaagggatgcg
actgccactctcaaagcgtggctcaatgaacaccgtaaaaatccctacccaaccaagggt
gagaagatcatgctggccatcattactaagatgacccttacccaagtgtccacctggttc
gcaaacgccagaaggcggttgaagaaagagaataaaatgacgtggaccccgaggaataga
agtgaggatgaggaagaagatgacaacattgacctggagaagaatgacgaagacgagcca
ctcaagcccacagcagaaattgggtcgaaaaatgaagcagttggacagcatccaaatcca
gtgggaatcccctgtgagaaatacaaagaggacaatagcggcaatgacatggaacctgtc
ttaactgatccggatataaaggaccacggggacaggagagtgaccgagatgccaccgccc
accaccgcagcatctccccaaaacgcggaccttggagcagagagggattcagactccgcg
gcctcggaaagtccacctccaccgaggcgtaatgactcaggcaactccagcaatgccaca
tcagtgattcactccgcacttccggcccagaaacctaaactgtggtcgctcgcggagatt
gcaacttcttcggataaatgtaaaggatgtagtgatgcctctcagaccatgcccggacaa
ttacgtacagagattccgggccgtaggcctatgtcatctccattgcgagacgctcctcag
aatcttttccctcacagcgcagccctatccagacatgtctattatacatctccctttttc
cagggttactcgaactatcatggcacttttggagacctgcagagcccgggatccaacgtg
gggtcagcgacacatttaaatggattacatcaaactatgttacacagagccgaggctctg
tcaagagacagccaagccaggagccaaacacagatagatatttgtaaagacttgagattt
gaaattaagaaaggtatgacacatgtctag
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