Coregonus clupeaformis (lake whitefish): 121576894
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Entry
121576894 CDS
T08357
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
cclu04148
Efferocytosis
cclu04218
Cellular senescence
cclu04310
Wnt signaling pathway
cclu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121576894
04310 Wnt signaling pathway
121576894
04020 Calcium signaling pathway
121576894
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121576894
09143 Cell growth and death
04218 Cellular senescence
121576894
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121576894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121576894
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
121576894
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
121576894
NCBI-ProteinID:
XP_041746381
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All DBs
Position
11:complement(46452302..46480517)
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AA seq
1065 aa
AA seq
DB search
MTTVNCSGNEELDFRLIFGEDAQQQLGPTGPDPGDSTPYYTTQSMINQPIGQAQDLQQSQ
QHHQAASQQALLQTYDNYHPSSSYEVHSSRYCPMGHLPKAFDCPSIQITSIGHSHQELGS
SQEAVPISGADGGGECGRERSWSRDHLYLPLDPGYRDSSSLNPSPCSSLSSRSWLSDVSS
CESFSHVYDDVEAELNEATSRFTMGSPLASPLASPGCSPQGQAAVGFGVELWQQQYFMNT
HSLSPHQSPRQSPRQSPCHSPRNSVTDENWLNPLPTSRSGSRPTSPCGKRRHSSADVYGH
GPSPSPSPHQSPCPTPGHSPRGSVTEDTWMVGSPGAMGALLYSLPEVDVPSKTRRTSKQA
HVGLLHGQGDSGLVLKDQGVVLPNLDSPAEESGSTLKQDGLFEELFFSVPSHFTWSKPKP
GNTPLFRTSSLPPLDWPLPSQFGQCELKVDVQPRGHHRAHYETEGSRGAIKAASGGHPVV
KLIGYNEKPVNLQIFIGTADDRYLRPHVFYQVHRVTGKTVATACQESVISSTKVLEIPLL
PENNMSTSIDCAGILKLRNSDIELRKGETDIGRKNTRVRVAFRVYIPQPSGKVLCLQAAS
IPVECSQRSATDLPQMQSCSPVSCLVSGGEEMVITGSNISPESKVIFLEKGPDGHTQWEV
DGKVIQEKSKRSRIVVEIPTYHNTTVSSAVQVQFYVCNGKRRRSQTQNFTYLAGASPHNY
PTASDHAVVAPRVKQELTDSTYLSTCTNLPGLYPTSSQLNSSDGAFSQDRPLYGSSDSHP
VPCGPPSQPAYTPSGSSPLQHSPHLHSYSPSMGYQRITPMHTPDPMPPPQTKPVYQATQH
NVPYSVQASSPMRPGPAAPQVNRPQSAQPRPAASSPHREGVMYQSLIGPDLSVATLQSAR
THTQNATQLQSLISHCSHSDSDLAALQAEYNLSYHSARNLPASYSPTPGVAATCSNSPSA
SASSGDPLRHLSPSSAQGLASGIDPQECPPAPHSLFSSNDRGRVNIKQEPKEKLPLGSMG
LQEITLDDVNEIIDRDISQLSCGDGAVESNRPGQDPYGWDTVILQ
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgactactgtaaattgtagcggcaatgaggaactggacttcagacttattttcggggag
gacgcgcaacaacagctaggccccacaggtccagaccctggtgacagcacgccatactac
accacccagtctatgatcaatcagcctattggccaggcccaggacttacaacagagccag
cagcaccatcaggctgcttctcaacaagctcttctccaaacctatgataactaccacccc
agctccagctatgaagttcacagttccagatactgtcccatgggacacctccccaaggca
ttcgactgcccaagcatccagatcacgtctatcggtcacagtcaccaagagctgggctcc
agccaggaggccgtgcccatcagcggggcagacggcgggggggagtgcggtcgtgaacgg
tcctggtccagggaccacctctacctacccctggaccccggttacagggactcatcctcc
ctgaaccccagcccttgcagcagcctgtcctccaggagctggctgtccgacgtgtcgtcc
tgtgagtccttctcccatgtttacgacgacgtggaggctgagctgaacgaggcgacttcc
cgattcaccatgggctccccgctggcctctcccctggcctcccctggctgctcaccacag
ggccaggccgcagtgggattcggggtggagctgtggcagcagcagtacttcatgaacacc
cactccctctcgccccaccagtcccctcgccagtcgccccgtcagtccccctgtcactct
ccacgcaacagcgtcacagacgagaactggcttaacccgctccccacctccaggtccggc
tcaaggcccacatcaccttgtggaaagagacggcactccagcgcagacgtctatggacac
ggaccttccccctccccatcccctcatcagtccccctgccccaccccgggccactctccc
aggggcagcgtaacagaggacacctggatggttggaagccctggtgccatgggggccctc
ctgtacagcctccctgaggtagacgttccttccaaaaccaggaggacctctaagcaggct
cacgtgggtctactgcatggacagggagactcagggctggtgctcaaagaccaaggagtc
gtgttgcctaacctggactcccctgcagaggagtctgggtctactctaaaacaggatggc
ctttttgaagaactatttttctcagttccctcacacttcacctggagcaaacccaaacct
ggcaacacaccccttttcaggacctcatccctgcccccactggactggcccctgcccagc
cagtttggccagtgcgagctgaaggtggatgtgcagccacggggccaccacagggcccac
tacgagacagagggcagtcggggggccatcaaggctgcctcagggggacaccctgtagtc
aagctcattggatacaacgagaagccagtcaacctgcagattttcattggaacggcagac
gatcggtacttgagaccacatgtcttctaccaggtgcacagagtaacgggaaagacggtg
gctactgcttgccaggaaagtgtaataagcagtacaaaggttctggaaatccctctcctc
ccagaaaacaatatgtccaccagtattgactgtgcaggcatcctgaagctgaggaactct
gacattgagctcaggaagggggagacagacatcgggaggaagaacacacgtgtgcgagtg
gcattccgtgtgtacatccctcagcccagcggcaaggtcctgtgtctgcaagctgcctct
attcctgtggagtgctcccagcgctcggccacagatcttccccagatgcagagctgcagt
cccgtcagctgcttggtcagtgggggggaggagatggtaatcaccggctccaacatatcc
ccagagtcaaaggtcatcttcctggagaaaggccctgatggacacacacagtgggaagtt
gacggaaaagttattcaagaaaagagtaaaagatccagaatcgtggttgagattcctacc
taccacaacaccactgtgagctctgcagtccaggtgcagttctacgtgtgcaacgggaag
aggagaagaagccaaacgcaaaacttcacatacttggctggtgcttctccacacaattat
cccactgccagtgaccatgcagttgtggctcctcgggtgaagcaggagctcaccgactca
acctatctgtctacttgcaccaatctccctggcctatatccaaccagcagccagctgaat
tcttctgacggggccttctctcaggacaggcccttgtatggttcctctgatagtcaccct
gtgccttgtggtccgccctcccagccagcatacactccctcaggctcctcgcctcttcag
cactcccctcacctccacagctacagtcccagtatgggataccagcggataacccctatg
catacacctgatccaatgccaccccctcagacaaagcctgtctaccaggccacacaacat
aatgtgccttacagcgtccaggccagctctcctatgagacctggccctgccgcaccccag
gtcaatcgacctcagtctgcccagcccaggccagctgcctccagccctcatagggaaggt
gtgatgtaccagagcctcattggacctgatctctctgtcgccactctccagtctgccaga
acccatacccagaatgcaacccagctgcagtctctaatatcccactgctcccactcggac
tctgacctagctgctctacaggctgagtataatctgagctaccactctgccagaaacttg
cctgcctcgtattcccccacccctggagtagcagcaacctgctccaactccccgtcagca
tcagcctcctctggggatcccctgaggcacctgtccccgagcagcgcccaggggctggcc
tctggtatcgacccccaggagtgtcccccggcaccccattccctcttctcatcaaacgac
agagggagggtgaacatcaagcaggaaccaaaggagaagctgcctctaggctccatgggg
ctccaggagatcacactagatgatgtgaatgagatcatcgacagagacatatctcagctc
agttgcggtgatggggcagtagagtccaaccgaccaggacaggatccttatggatgggat
actgtgatactccagtga
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integrated database retrieval system
