Coregonus clupeaformis (lake whitefish): 121576897
Help
Entry
121576897 CDS
T08357
Name
(RefSeq) leucine-rich repeat neuronal protein 3
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121576897
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121576897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_9
ig
fn3
Ig_2
Fn3_ELFN
LRRCT
LRRNT
Pur_ac_phosph_N
LRR_RPS2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
121576897
NCBI-ProteinID:
XP_041746384
LinkDB
All DBs
Position
11:complement(46329792..46346098)
Genome browser
AA seq
705 aa
AA seq
DB search
MKETAFVACLLAELALTAFVLASEGDAAHCPALCRCEIRPWFSPSSIYTEAPTVDCNDLG
LLTLPERLPSDTQVLLLQTNNIISVEKPLDYLANITEIDLSQNNISYVSDVRLGPLPHLL
SLHMEENWVPALSDSCLPSLPNLQEFYINHNLISSISPGAFQGLGRLLRLHLNSNRLRGI
SNEWFQPLPRLEILMIGENPIVQLSGMNFKPLVNLRSLVLARMNMSEIPDDTLVGLDNLE
SISFFDNLFARVPQAALKKAKSLKFLDLNKNPIERIQRGDFVDMFHLKELGINSMPALVS
IDSFALNNLPELTKIEATNNPKLSYIHPNAFHKLPRLETLMLNSNALSALHRGTVDSLPN
LREVSMHSNPIRCDCVIRWINMNWTGVRFMEPDSLLCVEPPEYQGQHVRQVHFRDMTEIC
LPLISPGSLPDRVTVGKGSLVTLHCRAFGEPEPEIYWVTPSGDRVLPNSVSDKYYMHPEG
TFEIYDTTEREAGLYTCVAHNLVGADLKSVLVVVDGYFPHPSDNGNALHVDVRSVQPNSV
SVSWDNTHGGLVSNIKWFTVANAKHPSIAYTARVPSDVKEYSLTHLNPSTQYRVCVEVTS
MQLGHNRDCVNVTTKGLAHPVESREKWDTVIMAACAVLFIVVAVAFSLIYTSLQSQHFYR
KMMVDQSQSLLSPSTRPSSASSLTELCVAGVKVRATVIDLPENSM
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagactgcgtttgtagcttgtttgttagcggagctagctctgactgcctttgtt
ctggcctcagagggggacgctgctcattgccctgcattgtgccggtgtgagatacgaccc
tggttctctccaagctctatttataccgaggctcccacggtggactgtaatgacttaggc
ctattgacactgccggagagactgccctcagacacacaggtgctattgttacagaccaac
aatatcatcagtgtcgagaaacctttggattacctggctaatatcacagagatagactta
tcccagaataacatatcctatgtgagcgatgtccgtctgggtcctcttccccatctgctg
tcactgcatatggaagagaactgggttccggccttatctgacagctgtctcccgtcactg
cccaacctccaggagttctacatcaaccacaacttgatctcctccatcagtcctggggcc
ttccaggggctggggaggctcctgcggctccatctcaactccaaccgtctgaggggcatc
agcaatgaatggtttcagccgctaccccgcctggagatcctgatgatcggggagaacccc
atcgtccaactgtcaggcatgaactttaagcccctggtcaacctacgcagcttagttctg
gccaggatgaatatgtctgaaatcccggacgacactctggtcggcctcgacaacctggag
agcatctcgtttttcgacaacctgtttgccagagtcccccaggctgctctgaagaaagcc
aagagcctgaagtttctggatctcaacaagaaccccattgagcggattcagagaggtgac
tttgtggacatgttccatctcaaagagctgggcatcaacagcatgcctgcactggtgtcc
atcgacagcttcgccctgaacaacctcccagagctgaccaagatagaggccaccaacaac
ccaaagctgtcctacatccatcccaacgccttccacaagctgccaagacttgagacgctg
atgctgaacagcaacgccctcagcgccctgcaccgcggcaccgtggactccctgcccaac
ctgcgcgaggtcagcatgcacagcaaccccatccgctgtgactgcgtcatccgctggatc
aacatgaattggaccggcgtacgcttcatggagcccgattccctcctctgtgtggagcca
cctgagtaccagggccagcacgtccgccaggttcacttccgggacatgaccgagatctgc
ctcccgctcatctcgcctgggagccttccagatcgagtcaccgtcgggaaagggagcttg
gtgacgctgcactgccgggcttttggagagccggagccagagatctactgggtcaccccc
tctggggacagagtcctgcccaacagtgtatctgataagtactacatgcatccagagggg
acctttgaaatctatgacactaccgagcgtgaggcaggactgtacacctgcgtcgctcac
aatcttgttggcgcagacctcaagtctgtgttggtggtggttgatggatactttccacat
ccttctgataatggtaatgctttacatgtggatgttagatcagtgcagcccaactctgtt
tcagtgtcttgggataatactcacggtggtcttgtatccaatataaagtggttcacagtg
gcaaatgctaagcacccctccatagcatatactgcgagagtaccatccgatgtgaaggag
tacagtctcacccacctgaacccctccacccagtaccgggtttgtgtggaagtcacaagc
atgcagctcggacacaacagggactgtgtcaatgtcaccacaaagggactggctcacccc
gtagagagcagggagaagtgggacacagtgataatggctgcctgtgctgtgctattcatt
gtggtcgctgtggctttctctctcatatacacatctctgcaaagccaacacttttacagg
aagatgatggtggaccaatctcagtcattgctcagtcctagcacccgccccagctccgcc
tcttctctcacggaactctgtgtggctggagtcaaggtgagggcaacagtaatagacttg
ccagaaaactccatgtaa
DBGET
integrated database retrieval system
