Coregonus clupeaformis (lake whitefish): 121576907
Help
Entry
121576907 CDS
T08357
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121576907
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121576907
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
121576907
NCBI-ProteinID:
XP_041746403
LinkDB
All DBs
Position
11:45304280..45321767
Genome browser
AA seq
470 aa
AA seq
DB search
MPQKEYYNRATWESGVASMMQNRQEVYDICNEGHSGVNQLGGVFVNGRPLPDSTRQKIVE
LAHSGARPCDISRILQTHGDAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPR
VATPEVVGKIAIYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSLSVSSINRVLRNLAS
EKQQMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNPDGCPQSDGGGENTNSISS
NGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEA
RIQVWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQSIPQPTTPGWISFSS
GSMLGRPDTALTNTYSALPPMPSFTMANNLPMQAPVPSQTSYSCMLPTSPSVNGRSYDTY
TPPHMQAHMNSQSMAGSGGNSTGLISPGVSVPVQVPGSEADMSQYWPRLQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccgggccacgtgggaatctggcgttgcgtccatgatg
caaaacagacaagaggtgtatgacatctgtaacgaaggtcacagcggagtgaatcagctc
ggcggagtgttcgtcaacggcagacccctgcccgactcaaccagacagaaaatagtcgag
cttgctcacagtggcgcgcggccgtgcgatatatccaggattctgcagacccatggtgat
gcaaaagtccaagtgctggacaatgaaaacgtgtcaaacggctgtgtgagtaagattctg
ggcagatactatgaaaccggctccatcagaccaagggcgatcggaggtagcaaaccaaga
gtagcaactccggaggtggtcggaaaaattgccatatacaagagggagtgcccttcaatc
ttcgcgtgggaaattcgtgacagactgctttcagagggggtctgcacaaacgataatata
cccagtgtaagttcattgagtgtgtcatcgataaacagagtactgcgcaacctggctagc
gaaaagcaacagatgggtgcagatggcatgtatgagaagttgagaatgctgaacggtcag
actgggacgtgggggacccggccgggctggtaccccggaacctcagtgccaggacagccc
aacccagatggttgcccacagtcagacggcggaggtgagaacactaattcaataagttcg
aatggagaagactcggatgagacccaaatgagacttcagctgaaaagaaaattgcaaagg
aaccgcacgtcattcacacaagaacagatagaagcgcttgagaaagagtttgaaagaact
cactatccagatgttttcgcaagggaaagacttgctgcaaagattgacctcccagaggcc
agaatacaggtgtggttttcaaatagaagggcaaagtggaggagagaggagaaactccgg
aatcaaaggcggcaagccagtaactcctccagtcacatccctatcagcagcagtttcagc
accagtgtctaccagtccatcccgcagcccacaacaccaggttggatatcgttctcgtca
ggatccatgttgggaagaccagacacagcccttacaaacacatacagtgccctgccacct
atgccaagcttcaccatggccaacaacctgcctatgcaagctcctgtgcccagccagacc
tcctactcctgcatgctgcccaccagtccctcagtcaacgggcggagctacgacacgtac
acccctcctcatatgcaggcacatatgaacagccaatcaatggcaggctcaggaggcaac
tcaacaggtctcatctctcctggagtatctgttcctgtccaagtcccaggcagtgaagca
gacatgtcccagtactggcccaggctacagtag
DBGET
integrated database retrieval system
