Coregonus clupeaformis (lake whitefish): 121576926
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Entry
121576926 CDS
T08357
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121576926
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121576926
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
bHLH_NCOA
PAS_2
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121576926
NCBI-ProteinID:
XP_041746458
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Position
11:complement(43530897..43555442)
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AA seq
632 aa
AA seq
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MNICDDLMADQRMDITSTMNEFMSPSSSDLISSSVNTPGMDYTRKRKGSTSDYQIDGFSF
DDSSMDTEKDKLRECGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSRK
LDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGFLFVVGCDRGK
ILFVSESVYKILNYCQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV
KTDITPGPSRLCSGARRSFFCRMKCNRPYVKTEDKDFPSTCSKKKADRKSFCTIHSTGYL
KSWPPTKMGLDDDNEPDNEGCNLNCLVAIGRLHPHIVPQPSHEDIRVKPTEYVCRHAIDG
KFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKI
KDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSCSMLDGADPSYPQSAISPTASMDSVL
TSEGGGRQALQTVPGIPGGTRAGAGKIGRMIAEEVMETQRTRGSTPSSCGSSPLNISTPP
PDCSPGGKRIQSGTPDIQSAGMLPGGPDSIGYPYSNQSIMSDNSHLSIDIMDEPGSSSPS
NDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttgtgatgatctaatggcagaccaaagaatggacattacctctacaatgaat
gagttcatgtcccccagctccagcgacctgatcagcagctccgtcaacaccccaggcatg
gactacacccgcaagaggaagggcagcacctccgactaccaaattgatggattttctttc
gacgatagcagtatggatacagaaaaggataaacttagggagtgtggtgatcaccagggc
cggataaaaaatgccagggaggcacacagtcagattgagaagcggcgcagggacaagatg
aacagcttcatagacgagctggcggcgctagtgcctacctgcaacgctatgtcccgcaag
ctggacaaactcacggtcctacgcatggctgtccagcatatgaagacattacgaggagca
gcaaacccttacacagaggcgaactacaagccatctttcctgtccgatgatgaactaaag
cacttaatattgagggctgctgatggctttctttttgttgttggatgtgatcgtgggaag
atccttttcgtctcagagtcagtttacaagatcctcaactattgccagaatgacctgatt
ggccagagtctgtttgattacctgcatcctaaagacatcgccaaagtcaaggagcaactg
tcgtcatcggatacagcaccccgggagcgactcatcgatgccaaaaccggcctaccagtt
aagacagacatcacccctgggccatctcgactgtgctccggggccagacgctcattcttc
tgccgaatgaagtgtaaccggccctacgtcaaaacagaggacaaggacttcccctccacc
tgctccaaaaagaaagccgaccgtaagagcttctgcacgatccacagtactggctacctg
aagagctggccgcccaccaagatgggcctggacgatgacaacgagcctgacaacgagggc
tgtaacctcaactgcctggtggccatcggccggctgcacccccacattgtcccccagccc
tcccacgaggacatccgcgtcaaacccaccgaatacgtctgccgccatgccatcgatggg
aagtttgtctttgttgaccagagggccacagccattcttgcatacttaccccaggagctt
cttggcacctccttctacgagtatttccatcaggatgatattggccacctggcagaatgt
cacagacaagtgctgcagatgagagaaaagatcaacacaaactgttacaagttcaagatt
aaagatggctccttcatcactctgcgaagccgctggttcagtttcatgaatccctggacc
aaagaggtggagtacattgtctccacaaacacagtggtctcgtgcagtatgctggacggt
gcagaccccagctatcctcagtctgctatctctcccactgcctctatggacagtgtgctg
acgtcagaaggtggagggagacaggcccttcagacggtgccaggcatccccgggggaaca
cgtgcaggcgccggcaagatcggccgcatgatcgcagaggaggtgatggagactcagagg
accagaggctccacaccctccagctgtggctccagccccctgaacatcagcacccctcct
ccagactgctctccagggggcaagagaattcagtctggaacgccagacattcagtcggca
ggaatgctaccaggaggacctgactccattggatacccatactccaaccagtccattatg
agcgacaactcgcacctcagcattgacatcatggacgaaccaggctccagcagccccagt
aacgacgaggcagccatggctgtgatcatgagtctcctggaggctgatgcaggcctcggt
ggccctgtggactttagtgacttaccctggcccttgtga
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