Coregonus clupeaformis (lake whitefish): 121576961
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Entry
121576961 CDS
T08357
Name
(RefSeq) solute carrier family 23 member 1
KO
K14611
solute carrier family 23 (nucleobase transporter), member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
121576961
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121576961
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC23: Na+-dependent ascorbic acid transporter
121576961
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Gene cluster
GFIT
Motif
Pfam:
Xan_ur_permease
Motif
Other DBs
NCBI-GeneID:
121576961
NCBI-ProteinID:
XP_041746523
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Position
11:complement(5948997..5974426)
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AA seq
613 aa
AA seq
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MSPEKESNGLENYAFAINGRFCELEKNGEVSELSEEDDKNKVAYRVTDVPPWYLCIILGI
QHLLTAFGGIIAIPLILSQGLCLQHDSLTQGHLISTIFFVSGVCTLLQVTFGIRLPIVQG
GTFALLAPSMAMLSMPEWTCPAWTQNASLVNTTSPEYIEVWQSRMRELQGSIMVGSLFQV
LVGFSGLIGFFMRFIGPLTIAPTISLIGLSLYDSAGMSAGNHWGISTMTTALIILFSQYL
RHIPVPFPTYSKTKKLHTSRIYIFQLLPVLLGITLSWLICYIFTISNVLPPEPEQYGYLA
RTDLKGDVIGQAPWFRFPYPGQWGLPTVSLAGVVGILAGVISSMIESVGDYHACARLSGA
PPPPKHAINRGIGIEGLGCLLAGAWGTGNGTTSYSENVGALGITKVGSRMVIVAGGVLMI
IMGLFCKIGAIFTTIPTPVVGGMFLVMFGVISAAGVSNLQYADMNSSRNMFIFGFSMFSG
LVIPNWIFKNPDAIATGVVELDQLLQVLLTTSMFIGGFFGFFLDNTIPGTLQERGIKAWN
KIPLDDSSNTLESSEVYNLPFGISSCLSSYSWVRYVPFLPPNTPSSQDKTEVDSLETMQQ
PVKPELIIRSVAL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagagaaggaaagcaatggtcttgaaaactacgcatttgctattaatgggcgt
ttctgtgagctggagaagaatggagaggtctctgaactctctgaggaggatgacaagaac
aaagtggcctaccgtgtcacagacgtcccaccctggtacctatgcatcatccttggcatc
cagcatttactgacagcgtttggggggataatcgccatccctctgatcctgtctcagggt
ctgtgtctgcagcatgacagcctgacccagggtcacctcatcagcaccatcttctttgtg
tcaggtgtgtgcaccctgctgcaggtcaccttcggaatcagactgcccattgttcaaggg
ggtacctttgccttgctggctccctccatggctatgctttcaatgccagagtggacgtgc
cctgcctggacccagaatgcttccctggtcaacaccacctctcctgagtacatagaggtg
tggcagagccgcatgcgagagctgcagggctccatcatggtgggctctttgttccaggtg
ctggtgggtttctcaggcctcatcggtttcttcatgcgttttattggccccctcaccatc
gctcccaccatctctctgattggcctgtccctgtatgactcggctggaatgagcgcaggg
aaccactggggcatctcaactatgacaactgctctgatcatcctgttctcccagtacctc
cgacacatccctgtaccattccccacatacagcaagaccaagaaactccacacctccagg
atctacatcttccagcttctacctgtgctccttggcatcacactgtcatggctgatctgt
tacatcttcaccatctctaacgtcctgcccccagagccagagcagtacggctacctggct
cgcacagacctgaagggggatgtcataggccaggccccctggttcagattcccataccca
ggtcagtggggcttaccaactgtgagcctggcgggagtggtagggatcttggctggggtg
atatcctccatgatagagtcggtgggggactaccacgcctgtgccaggctatcaggggcc
cctccaccccccaagcatgccatcaacaggggcattggcattgaggggcttggctgtctg
ctggctggggcctggggcacgggcaacggaaccacctcctacagtgagaatgtgggcgca
ttgggcataaccaaggttggcagtcggatggtgatcgttgctggtggcgtcttgatgatc
atcatgggactattctgtaaaattggagccattttcaccaccatccccacacctgtggtt
ggaggaatgttcttggtcatgtttggggtcatatctgcagctggagtttcaaatctgcag
tatgcagacatgaactcctcccggaacatgtttatctttggattttccatgttttccggg
cttgtcattccaaattggatattcaagaacccggatgccatagcaacaggtgtggtcgag
ctggaccaactgctgcaggtgcttctgacaaccagcatgtttattggaggcttctttggg
ttcttccttgacaacaccattccaggaaccttgcaggagcggggcatcaaagcctggaac
aagatcccccttgatgactccagcaacaccttggagagcagcgaggtgtacaaccttcca
tttggaatcagctcttgtctctcctcctactcctgggttcgatatgtgccgttcctccct
ccaaatacacccagctcacaggacaagaccgaggtggactctttggagaccatgcagcag
cctgtgaagccagagcttatcatcagatcagtggccctatga
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