Coregonus clupeaformis (lake whitefish): 121576991
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Entry
121576991 CDS
T08357
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121576991
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Other basic domains
RF-X
121576991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
121576991
NCBI-ProteinID:
XP_041746583
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Position
11:complement(3103936..3132463)
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNTSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKHDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPD
FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKIALHD
LPENLRNIKFELSRRFSQVLKRQTSLNHLCQASRTVIHSADITFQMMEDWRNVDLNSITK
QTLYTMEDTREEHRRLIIHLYQEFDHLLEEQSPIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRSMKAEGNTAEQEEEMMLTETTPTSTSPGPFSPAKSVTSVGVPAASSPTAAQSPEYTGA
TTTTGAVQSYTWSLTYTVTTSGGTPSEGGQQQPCMRSGAPVPPPSSAHRLPVYAHRDEHG
FTGSYNYGSYSNQHPHSIQSQYPSLAHEPGIPAPLHYPAYHRTSAQYPLNSQMSRMEPCL
MGGTPRLHPTPVAPRWADVSPANSCYTSPPIHSSRYAASGDMYSPLAPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgcctcaacgagagcgagagcaagcggtattccagtcacacgtccctggggaatacgtcc
aatgacgaaaatgaggagaaagaaaacaacagggcatctaaaccccattcaacaccagct
accctacaatggctggaggagaactatgagattgcagaaggggtttgtatcccccgcagt
gctctctacatgcactacctggacttctgtgagaagcacgacacacagcctgtcaacgcc
gccagctttgggaagattattagacaacagtttccacaactgaccacaagaagactgggg
accaggggccagtcaaagtaccactactatggcatcgctgtgaaggagagctcccagtac
tacgacgtgatgtactccaagaagggggcggcgtgggtgaacgagacgggcaagaaggag
gtcaccaagcagacagtggcgtattcaccacgctccaaactggggacgctcctgccagac
tttccaaatgtcaaagacctaaatctgcctgccagtctgccagaagagaaggtgtcaacg
ttcatcatgatgtacagaactcactgccagaggatactggatacagtaatacgcgcaaac
tttgacgaggtccagagcttcctgctgcacttttggcagggcatgcccccccacatgctc
cctgtcctgggctcctccactgtggtcaacatcgttggcgtctgtgactccatcctctac
aaggcaatctctggggttctcatgcccactgtccttcaagcactgcctgatagtttgacc
caggtgatccggaagtttgccaaacagctggatgagtggcttaaaatagcacttcacgac
ctgcctgaaaacctgaggaatatcaaatttgaattatctagaagattttctcaggttctc
aagcggcagacatctttgaaccatctatgtcaggcatcgcggacggtgatccacagtgca
gacatcacctttcagatgatggaggactggaggaacgtggacctgaacagcatcaccaag
cagacactttacaccatggaggacacacgggaggagcaccggcggctcatcatccacttg
taccaggagtttgaccatctgctggaggagcagtctcctatagaggcctacatagagtgg
ctggactccatggtggaccgctgtgttgtcaaggtggcagggaagaggcctgggtgcctg
aagaaggtggcccagcagttcctgctcatgtggtcgtgcttcgggacacgagtcatccgg
gatatgaccctccacagtgcgcctagcttcggctcattccacctgatccacctgatgttt
gatgactatgtgctgtacctgctggagtccctgcactgccaggagagggccaacgagctc
atgaggtccatgaaggcagagggcaacacagctgagcaagaagaagagatgatgctgacg
gagaccacgcccacctccacgtccccagggcccttctcgccggccaagtctgtcacctca
gtgggggtcccagccgccagctcccccactgctgcccagtccccagagtacacaggggcc
acaaccaccacaggagctgttcagtcatatacctggtcccttacgtacacagtgacaacg
tcaggcggcaccccttctgagggcggacagcagcagccttgcatgcgcagtggtgcccca
gtgccccctccctcctctgcccatcgactgccagtctacgcacacagggatgaacacggg
ttcactgggagctataactacggaagctactcaaaccagcacccccactccatccagagc
cagtaccccagtctggcccatgaaccgggtatccctgcccccctccactatcccgcctac
caccgcacctctgcacagtacccactcaacagccagatgtcacggatggagccctgcttg
atgggaggtactcctcggctgcaccctacgcccgtggccccccggtgggctgatgtctcc
ccggccaacagctgttacaccagtccccctatacactcctcccgctacgctgcctctgga
gacatgtactcccccctggcccctcgcaggaactctgagtacgaacactcacaacacttt
cccggcttcgcctacatcaatggagaggccaccacaggctgggccaagtag
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