KEGG   Coregonus clupeaformis (lake whitefish): 121576993
Entry
121576993         CDS       T08357                                 
Name
(RefSeq) liprin-beta-1 isoform X1
  KO
K27096  liprin-beta
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121576993
Membrane trafficking [BR:cclu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    121576993
SSDB
Motif
Pfam: SAM_1 SAM_2 SAM_PNT DUF16 LMBR1 Spc29 FlaF
Other DBs
NCBI-GeneID: 121576993
NCBI-ProteinID: XP_041746586
LinkDB
Position
11:2912880..2999094
AA seq 1018 aa
MMSDASDMLAAALEQMDGIIAGSKSMDYSNGLFDCQSPTSPFMGSLRALHLLEDLRGVLE
LMDTEEREGLRCQIPDATADSLVDWLQQGHLVSNGHHISMGGDLYQERLSRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLDMCLDEHQEKLNATEEMLQQELLCRTSLETQKLDLMAEVS
NLKLKLNSFEKDRLHFDLRDSEDMGLEINELRYRVTEMESERLQYEKKLKSTKSLMAKLS
SLKIKVGQMQYEKQRKEHKLQALKEELATLRRQLEGRDGELRRLHGETGFRAITPGGMDS
GDRVSHPDETLKKRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELRQSLLHYKKVQDMV
MSVQEKKDKTKDGESDESNSDNSLSMMSTTTTPVALESERHALAGVEEVAGKSPDELETH
YGATEVSSPTPSPTVLSACDLQRGPELDQAEPERTLDIPKSGSQDNLYVSNSEKITLVIK
EKPTEKADNLFLLLKNKAVEEISKISERPPKSPSSSRPEDDSFGTKKARSSFGRGFFKIK
GGKRTASAPNLAETEREGDTDHLDLAGLPQRSAISDSTNTLTSVTSNTSPEGKKKSRGIK
ALFGKLRRSQSTTFNLDDNLSEPVEFKRGGVRATAGPRLGWSRDLQQSPNNDLDTPFARW
SKEQVCDWLQEQGLGLYLNMAHMWISSGQTLLQASQQDLERELGIKHLLHRKKLQLALQA
LGSEEDDNKGKLDYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVGSVL
HHLSIKRAIQVLRLNNYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLAEYAPN
LRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLVGSEAQGLKQECLE
NPDYTLLTATAKVKPRKMSFGSFGSLRKKRQDDSEEYVCPMDVEMPKGRSFQKGYELQLY
EDDLDRLEQMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFKEISNSPNPSVTDDDSNV
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgatgtctgatgccagtgacatgttggcagcagccttggagcagatggatgggataata
gcaggctccaagtccatggactactccaacggcctgtttgactgccagtcacccacctct
cccttcatgggcagcttgcgggcgctgcatctgctggaggacctccggggcgtgctggag
ctgatggacaccgaggagagggagggcctgcgctgccagatccccgatgccaccgcagac
agcctggtggactggctgcagcaaggacacctggtgtccaatggccaccacatctccatg
ggtggtgacctctaccaggagagactgtctcgactggagggtgacaaggaatccctggtg
cttcaggtgagtgtgttgacagaccaggtggaggcgcagggggagaagataagggacttg
gacatgtgtctggatgaacaccaggagaaactgaacgccactgaggagatgctacaacag
gagctcctgtgcagaacgtctctagagactcagaaactggacctaatggctgaggtgtcc
aacttgaaactgaagctgaactcatttgagaaggacagactacactttgacctcagggac
agtgaggacatgggtctggagattaatgagctgaggtacagagtgaccgagatggagagt
gaaagacttcagtatgagaagaaactgaaatccactaagtcgttaatggctaagctttct
agcctgaaaatcaaagtgggccagatgcagtatgaaaaacagaggaaggagcacaaacta
caggcactgaaggaggagctggcgacgctgaggaggcagttggagggaagggacggagag
ctgaggaggttacacggtgagactgggttcagagccatcacgccgggtggcatggacagt
ggagacagagtctctcacccagatgaaactcttaaaaagaggctgaaagagaaacatgtg
gaagtgcagagaatgaaaaaagcggtggagtcactgatggcagccaatgaggagaaggat
cgtaagattgaggagctgaggcagtcgctgctgcactacaagaaggtccaggacatggtg
atgtcagtgcaagagaagaaagacaaaaccaaagatggtgagagtgacgagagtaacagc
gacaactccctctccatgatgtcaacgacgaccaccccggttgccctggagtcggagagg
cacgcgctagccggagtcgaggaagtagcagggaagagcccagacgagctggagacgcac
tatggagctactgaagtgtcttcacccacacccagccctacagtcctgtcagcctgcgat
ctacagagggggccagagcttgaccaagctgaacctgagaggaccctggatatcccaaag
tcagggagtcaggataacttgtatgtcagcaacagcgaaaagattacattggtgattaaa
gaaaagccaacagagaaggctgacaatctattcctccttctgaagaataaggctgtggag
gagatcagtaagatcagcgagcgcccgccaaagtctccctcttcatctcgcccggaggac
gacagctttggtaccaagaaggctcgctcctccttcggccgaggcttcttcaagatcaag
gggggcaagaggacagccagcgcccctaacctggctgagaccgagcgagagggggatact
gaccatctggacctggccgggctaccccagaggtcagccatcagcgacagcaccaacaca
ctgaccagtgtgacctccaatacctctcccgagggcaagaagaagtccaggggaatcaag
gcgctctttggaaagctgaggagaagtcagtccacaacgttcaacctggatgacaaccta
tcagagccggttgagttcaagagaggcggagtccgagccacagctggtcccagactgggc
tggtcccgtgacctacagcaatcacccaacaatgacctggacaccccgtttgcccgctgg
tccaaggagcaggtgtgtgactggctgcaggagcagggactggggctctatctgaatatg
gcccacatgtggatctcttctggacagactctgctgcaggcctcacagcaggacctagaa
agggagctgggcatcaaacacctgctgcacaggaagaagctccaactggccctgcaggct
ctgggatctgaggaggacgacaacaagggcaaactggactacaactgggtgaccaggtgg
ctggatgacattggcctgcctcagtataagacccagtttgatgaggggagggtggacggc
cgcatgctgcactacatgacagtagatgacctactgtctctgaaggtgggcagtgtgctc
caccacctcagcatcaagagagccattcaggtgctgcgcctcaacaactacgagcccaac
tgcctgcgccgacggccctccgatgagaacaacatcacaccagcagagatctcccagtgg
accaatcacagagtaatggagtggctgagatcagtagacctggcggagtacgcccccaac
ctgaggggcagcggcgtccacgggggactcatggtgctggagcctcggttcaacgtggag
accatggccctgctgctgaacattccccccaacaagacactgctgcggaggcacctggcc
acccacttcaacctgctggtgggctctgaggcccaggggctcaaacaggagtgtctggag
aaccctgactacaccctgctcaccgccaccgccaaggtcaagccgaggaagatgtcgttt
gggagcttcggcagcctgagaaagaaaaggcaggatgacagtgaggagtatgtctgcccc
atggacgtggagatgccaaagggacgtagcttccagaaaggctatgaactccagctctac
gaggacgacctggaccggctagagcagatggaggactcagagggaactgtgaggcagatc
ggagccttctctgagggcatccaaaacttgacgagcatgctgaaagatgatgaattcttc
aaagagatctctaactctcccaaccccagcgtaacagatgacgattccaacgtgtga

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