Coregonus clupeaformis (lake whitefish): 121576993
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Entry
121576993 CDS
T08357
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121576993
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121576993
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GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
LMBR1
Spc29
FlaF
Motif
Other DBs
NCBI-GeneID:
121576993
NCBI-ProteinID:
XP_041746586
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Position
11:2912880..2999094
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AA seq
1018 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKSMDYSNGLFDCQSPTSPFMGSLRALHLLEDLRGVLE
LMDTEEREGLRCQIPDATADSLVDWLQQGHLVSNGHHISMGGDLYQERLSRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLDMCLDEHQEKLNATEEMLQQELLCRTSLETQKLDLMAEVS
NLKLKLNSFEKDRLHFDLRDSEDMGLEINELRYRVTEMESERLQYEKKLKSTKSLMAKLS
SLKIKVGQMQYEKQRKEHKLQALKEELATLRRQLEGRDGELRRLHGETGFRAITPGGMDS
GDRVSHPDETLKKRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELRQSLLHYKKVQDMV
MSVQEKKDKTKDGESDESNSDNSLSMMSTTTTPVALESERHALAGVEEVAGKSPDELETH
YGATEVSSPTPSPTVLSACDLQRGPELDQAEPERTLDIPKSGSQDNLYVSNSEKITLVIK
EKPTEKADNLFLLLKNKAVEEISKISERPPKSPSSSRPEDDSFGTKKARSSFGRGFFKIK
GGKRTASAPNLAETEREGDTDHLDLAGLPQRSAISDSTNTLTSVTSNTSPEGKKKSRGIK
ALFGKLRRSQSTTFNLDDNLSEPVEFKRGGVRATAGPRLGWSRDLQQSPNNDLDTPFARW
SKEQVCDWLQEQGLGLYLNMAHMWISSGQTLLQASQQDLERELGIKHLLHRKKLQLALQA
LGSEEDDNKGKLDYNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVGSVL
HHLSIKRAIQVLRLNNYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLAEYAPN
LRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLVGSEAQGLKQECLE
NPDYTLLTATAKVKPRKMSFGSFGSLRKKRQDDSEEYVCPMDVEMPKGRSFQKGYELQLY
EDDLDRLEQMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFKEISNSPNPSVTDDDSNV
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagcagccttggagcagatggatgggataata
gcaggctccaagtccatggactactccaacggcctgtttgactgccagtcacccacctct
cccttcatgggcagcttgcgggcgctgcatctgctggaggacctccggggcgtgctggag
ctgatggacaccgaggagagggagggcctgcgctgccagatccccgatgccaccgcagac
agcctggtggactggctgcagcaaggacacctggtgtccaatggccaccacatctccatg
ggtggtgacctctaccaggagagactgtctcgactggagggtgacaaggaatccctggtg
cttcaggtgagtgtgttgacagaccaggtggaggcgcagggggagaagataagggacttg
gacatgtgtctggatgaacaccaggagaaactgaacgccactgaggagatgctacaacag
gagctcctgtgcagaacgtctctagagactcagaaactggacctaatggctgaggtgtcc
aacttgaaactgaagctgaactcatttgagaaggacagactacactttgacctcagggac
agtgaggacatgggtctggagattaatgagctgaggtacagagtgaccgagatggagagt
gaaagacttcagtatgagaagaaactgaaatccactaagtcgttaatggctaagctttct
agcctgaaaatcaaagtgggccagatgcagtatgaaaaacagaggaaggagcacaaacta
caggcactgaaggaggagctggcgacgctgaggaggcagttggagggaagggacggagag
ctgaggaggttacacggtgagactgggttcagagccatcacgccgggtggcatggacagt
ggagacagagtctctcacccagatgaaactcttaaaaagaggctgaaagagaaacatgtg
gaagtgcagagaatgaaaaaagcggtggagtcactgatggcagccaatgaggagaaggat
cgtaagattgaggagctgaggcagtcgctgctgcactacaagaaggtccaggacatggtg
atgtcagtgcaagagaagaaagacaaaaccaaagatggtgagagtgacgagagtaacagc
gacaactccctctccatgatgtcaacgacgaccaccccggttgccctggagtcggagagg
cacgcgctagccggagtcgaggaagtagcagggaagagcccagacgagctggagacgcac
tatggagctactgaagtgtcttcacccacacccagccctacagtcctgtcagcctgcgat
ctacagagggggccagagcttgaccaagctgaacctgagaggaccctggatatcccaaag
tcagggagtcaggataacttgtatgtcagcaacagcgaaaagattacattggtgattaaa
gaaaagccaacagagaaggctgacaatctattcctccttctgaagaataaggctgtggag
gagatcagtaagatcagcgagcgcccgccaaagtctccctcttcatctcgcccggaggac
gacagctttggtaccaagaaggctcgctcctccttcggccgaggcttcttcaagatcaag
gggggcaagaggacagccagcgcccctaacctggctgagaccgagcgagagggggatact
gaccatctggacctggccgggctaccccagaggtcagccatcagcgacagcaccaacaca
ctgaccagtgtgacctccaatacctctcccgagggcaagaagaagtccaggggaatcaag
gcgctctttggaaagctgaggagaagtcagtccacaacgttcaacctggatgacaaccta
tcagagccggttgagttcaagagaggcggagtccgagccacagctggtcccagactgggc
tggtcccgtgacctacagcaatcacccaacaatgacctggacaccccgtttgcccgctgg
tccaaggagcaggtgtgtgactggctgcaggagcagggactggggctctatctgaatatg
gcccacatgtggatctcttctggacagactctgctgcaggcctcacagcaggacctagaa
agggagctgggcatcaaacacctgctgcacaggaagaagctccaactggccctgcaggct
ctgggatctgaggaggacgacaacaagggcaaactggactacaactgggtgaccaggtgg
ctggatgacattggcctgcctcagtataagacccagtttgatgaggggagggtggacggc
cgcatgctgcactacatgacagtagatgacctactgtctctgaaggtgggcagtgtgctc
caccacctcagcatcaagagagccattcaggtgctgcgcctcaacaactacgagcccaac
tgcctgcgccgacggccctccgatgagaacaacatcacaccagcagagatctcccagtgg
accaatcacagagtaatggagtggctgagatcagtagacctggcggagtacgcccccaac
ctgaggggcagcggcgtccacgggggactcatggtgctggagcctcggttcaacgtggag
accatggccctgctgctgaacattccccccaacaagacactgctgcggaggcacctggcc
acccacttcaacctgctggtgggctctgaggcccaggggctcaaacaggagtgtctggag
aaccctgactacaccctgctcaccgccaccgccaaggtcaagccgaggaagatgtcgttt
gggagcttcggcagcctgagaaagaaaaggcaggatgacagtgaggagtatgtctgcccc
atggacgtggagatgccaaagggacgtagcttccagaaaggctatgaactccagctctac
gaggacgacctggaccggctagagcagatggaggactcagagggaactgtgaggcagatc
ggagccttctctgagggcatccaaaacttgacgagcatgctgaaagatgatgaattcttc
aaagagatctctaactctcccaaccccagcgtaacagatgacgattccaacgtgtga
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