Coregonus clupeaformis (lake whitefish): 121577000
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Entry
121577000 CDS
T08357
Name
(RefSeq) early endosome antigen 1 isoform X1
KO
K12478
early endosome antigen 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121577000
04145 Phagosome
121577000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121577000
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121577000
Protein recycling
Other Rab GTPase associated proteins
121577000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
Crescentin
ATG14
zf-C2H2_ZNF462_11
DUF4472
Fez1
FYVE_CARP1-2
IBR
Motif
Other DBs
NCBI-GeneID:
121577000
NCBI-ProteinID:
XP_041746608
LinkDB
All DBs
Position
11:complement(2580777..2650676)
Genome browser
AA seq
1398 aa
AA seq
DB search
MLRRILQMTPGKGGAQNSDSDQPSADLNNDQTSEGFICPQCMKSHNSAEELFKHYELYHD
SGDQPSHMGPGREDLVLLRQELQELQTSLKEEKWFSGELKKELDKVQGHLKQAPQNDGQT
GSEDSALAIKLNEAETETFNIKQMKDLFEQKAAQLATDIVAVKSRYDEEKSLREAADQRL
ANLSQELQRERQDKDQLHTELLQRPGVEDVEVLRKELIQVQTLMDSMTREREEESERLKS
KYEQLQADHTSSEMTISQLKAELEKGPQEAAVYTQQIHQLQSSLNNLQQQIQMLSEKLVR
REKEFQELEEGLRAEQVSKKTAQASLHQRELEVQELQARAAAAEASLQRAQAELGELGDQ
AGRLRREVAELEAKHREVKMERKQLQQQREERESQGLVQQSEISQLHAKLLEAERQLGEV
QGRLKEQRQLSGEKLKDREQQAADLQIKLSRSEEQLKENSSKTLDLQHQLEKAKQQHQEL
QGLLQNTNTKLREAQNDLEQVLRQIGDKDQKIQNLDALLQKSKDSVSQLEAEREDLVAKI
QAGEGEAAVLNQLQEKNHTLQTQVTHLTDKLKNQSESHKQAQDNLHKQLQEQKTLLRAAQ
DQAQAVETSLKELNAQLTESREKVAQLDTQLKAKTEMLLSAEAAKAAQRVDLENHLETAQ
HALQDKQQELSKSQACGEEQGRRLQERQEQCGQLEASLKEVKDKLLISEQRVEQLEVRAK
KAEAEGVELRAAREQAQQEVQKLQKQGSEVKGKLKELCCQLETEKAGAVALQEELKRKTS
SLSDTRQQLEQCEQEKTSLQANLEKLAQEGQAQQAELDRKAQGLARELQKAQQEKEAQGK
ELLVVKDGLAKASKAIKDSQSQLDKERKSSKAVMEEREKSHEKARQDLLKATEATTKEMA
EVKGQLDKIIEAEKGLKMQLTALTEQHTKTQEALKEKDKGVQQLQAQLKTAQGSFSQEKK
KLESQVTELQGAHAKKAEEEGRLREQVSGLGQDLSSERTRTTELQKVLEQCQEGLAKLQS
DYYGKESELSSLRQDLKASEERLTLFQEELAANRTQLTGLEGQVQEVKAARASLEQELAK
RDQRLGQQETALKELQKQQGVTQEELQKERGRAEELSQTKAVLEKDTIRLGSELKSLRER
SDKELRELRESKQLLIQQKLETQGRVEEVQAALEQEKTQHQATRDSVTQKEEKLRAETQE
VQAQLASERNAREGQAKRGEEAEARLGLQVTALNENVATLKREWQGSQRHCVELEKQTDE
LRGEIAVLEATVQNNQDERRVLLERCVNGEGEMEKLQAKVVEMRRKLDDTTAAMQELGRE
NQSLQIKQSQSLTRKWAEDHEVQNCMDCGKGFSLAIRKHHCRHCGNIFCAECSAKNALIP
SSKKPVRVCETCFEDLQG
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgcttagacggatacttcaaatgactcctgggaaaggaggcgctcagaactctgattca
gaccagcccagtgcagacctcaacaatgaccagacctccgaggggttcatctgtccccag
tgcatgaagtcccacaactcagcagaggagctgttcaagcactatgaactataccacgat
tcgggagaccagccctcccacatgggccctggccgtgaagaccttgtgcttctccggcaa
gagttgcaagaactgcagacttcgctcaaggaggagaaatggttctctggggagctgaag
aaggaactggacaaagtgcaaggacacctgaagcaagctccacagaacgatggccagacg
ggctcagaggattctgccctggcaattaagctaaacgaggcggagacagagacgttcaac
atcaagcagatgaaagacctgtttgagcagaaggctgcccagctggccacagatatagtg
gccgtaaagtctcgttatgatgaggagaagagcctgagggaggctgcagaccagaggctg
gcaaacctgagccaggagctgcagagagagaggcaggacaaggaccagctccacactgaa
ctgctgcagcggccaggagtggaggacgtggaggtactgcggaaggagctgattcaggtg
cagacgttgatggacagcatgacacgtgagagggaggaggagtcagaacgcctcaagagc
aaatacgagcagctgcaggctgaccacaccagctcagagatgaccatctcccagctgaag
gcagagctagaaaagggacctcaggaggcagccgtgtacacccagcagatccaccaactc
cagagctctctgaacaacctgcagcaacagatccagatgctttcagagaagctggtgcgc
agggagaaggagtttcaggagctggaggagggcctgagggctgagcaggtctccaagaag
acagcccaggccagcctgcaccagagggagctggaggtgcaagagctccaggcccgggcg
gcggctgccgaggccagcctgcagagagcccaggcagagctgggggagctgggggaccaa
gccgggaggcttcgaagggaggtggctgagctggaggccaagcacagggaggtgaagatg
gagaggaagcagctgcagcagcagagggaggagagggagagccagggcctggtgcagcag
agtgagatcagccagctgcatgctaagctgctggaggcggagcgccagctgggggaggtg
cagggccgtctgaaggagcagaggcagctctctggggagaaactgaaggaccgcgagcag
caagccgccgacctgcagatcaaactgtcccgctcagaggaacagttgaaggagaacagc
agtaagacgttggacctgcagcaccagctggagaaagctaagcagcaacaccaggagctc
cagggcctgctgcagaacaccaacaccaagctgcgagaggcacagaatgacctggagcag
gtgctgcgtcagattggggacaaggaccagaagatccagaacctggatgccctgctgcag
aagagcaaggacagtgtgagccagctggaggccgagagggaggacctggtggccaaaatc
caggctggggagggagaggcggccgtgctcaaccagctacaggagaagaaccacacacta
cagacgcaggtcacacacctgacagacaaactgaagaaccaatcggagagccacaagcag
gcccaggacaacctccacaagcagttgcaggagcagaagaccctcctgcgggcggcacag
gaccaagcccaggctgtggagacctctctaaaggaactgaacgcccagctgaccgaaagc
agggagaaggtggcccaactggacacacagttgaaggctaagacagagatgctgctgtcg
gccgaggcagccaaggcagcccagagagtagacctggagaaccacctggagacggcccag
catgcactgcaggacaagcagcaggagctgagtaagagccaggcgtgtggggaggagcag
ggccggaggctgcaggagagacaggagcagtgtggccagctggaggccagtctgaaagag
gtcaaagacaaactactgatctcagaacagcgcgtagagcagctggaggtgcgggccaag
aaagcggaggcggagggggtggagctgcgtgctgccagggagcaggcccagcaggaagtg
cagaagctccagaagcaggggtcagaagtcaagggaaagctgaaggagctgtgttgccaa
ttggagactgagaaggctggggctgttgcgttacaggaggagctgaagagaaaaacctcc
tccctgagtgacacgcgacagcagctggagcaatgtgagcaggagaagacctccctccag
gccaacttggaaaagctagcccaggaggggcaggcgcagcaggcagagctggacaggaaa
gcccagggcttggccagggagctccagaaggcccagcaggagaaggaggcccaggggaag
gagctgttggtggtcaaggatggcctggctaaggcctccaaagccatcaaggacagccag
agccagctggacaaggagaggaagagcagcaaggcagttatggaggagagggagaagtcc
catgagaaggccagacaggatctgctgaaggccacagaggccaccaccaaggagatggca
gaggtcaaagggcagttggacaagatcatagaggcagaaaaagggctgaagatgcagctg
acagcattaacagagcagcacaccaagacccaggaggccctgaaagagaaggataagggg
gtgcagcagctgcaggcacagctgaagacagcccaggggtccttcagccaggaaaagaag
aagctggagagccaagtgaccgagctgcaaggagcacatgccaagaaggctgaggaggag
ggtcgtctgagggagcaggtgtcaggcctcggccaggatttgagctctgagaggaccagg
accactgagctgcagaaggttctagagcagtgtcaagaaggcctggccaagctgcagtct
gactactacggcaaggagtcagagttgtcatctctcagacaggacctcaaggcgtctgag
gagaggctgaccctgttccaggaggagttggctgctaaccggacccagctgactggtcta
gaggggcaggtccaggaggtaaaggctgccagggcctccctggagcaggagctggctaaa
cgggatcagaggcttggccagcaggagacagccctcaaagagttgcagaaacaacagggt
gtgacccaggaggagctgcagaaggagaggggcagagcggaggagctgagccagactaag
gctgtcctggagaaggacacgataagactgggctctgagctgaagtcactcagggagagg
agtgacaaggagttgagggagctgcgggaatccaagcaactgttgatccagcagaagctg
gagacgcagggccgggtggaggaggtgcaggcagccctggagcaggagaagacccagcac
caggccaccagagacagtgttacccagaaagaggagaagctacgggcagagacccaggag
gtccaggcccagctggcgtcagagcgtaatgctcgggaggggcaggcgaagcggggagag
gaggcggaggcgcggctgggcctacaggtgacggcgctcaacgagaacgtggccacgctg
aagagggagtggcaggggagccagcggcactgcgtcgagctggagaagcagaccgacgaa
ctgcggggcgagatcgccgtgctggaggccactgtgcagaacaaccaggacgagaggcgt
gtgctgctggagaggtgtgtgaatggtgagggggagatggagaaactgcaggccaaggta
gtggagatgaggaggaaactggatgatacgacagccgccatgcaagagctgggcagagag
aaccagtcactacagataaagcagtcacagtctctgaccaggaagtgggcggaggaccac
gaggtacagaactgcatggactgtgggaagggcttctctctcgccattaggaagcaccac
tgcagacactgtggcaacatcttctgtgcagagtgctccgccaagaacgccctcataccc
tcctccaagaagcctgtgcgggtttgtgagacatgcttcgaggatctccagggctga
DBGET
integrated database retrieval system
