KEGG   Coregonus clupeaformis (lake whitefish): 121577002
Entry
121577002         CDS       T08357                                 
Name
(RefSeq) LIM domain-binding protein 3
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121577002
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121577002
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   121577002
SSDB
Motif
Pfam: LIM DUF4749 PDZ PDZ_6
Other DBs
NCBI-GeneID: 121577002
NCBI-ProteinID: XP_045062025
LinkDB
Position
1:48871427..48945857
AA seq 864 aa
MSTYNISLSGPAPWGFRLQGGKDFNMPLTISRITPGSKAQQGNLIQGDIIVAIDGVSTEG
MTHLEAQNKIKCASFNLALTMQKSKRPALQSATPRIDSPMQQIPHQKVIFNTPANNEYVP
NFNPNVLKDTALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSQSKGHE
GGSLPVKDAQVDSASPVYQAVIKTADRDMELNDWARSSSQVQSKSFRLLAHITGTEFMQD
PDVEHLRKSREKFDTEFKGPRFAKLKNWHNGLSAQILNVPEKALTHSPTWAVGIYDFRPQ
TADGFLSMQPNLLCSSPVEHAPVSISPAPVALPASAASPNQVASPAASQSPEPAPVAPES
EQPPPDTQTQPVAPEAPAIPSGGPRHLTHAASHISSALITQSRNKVYKQGPPPTSALEAL
SITPVFRTSTLPKRKRTLPSGKPKHLSSYSLQQSASGYSSQHKSSVSSQYGQAPPMQQAP
PMYQGQSMYQGPPMQQGPPMYQGPPMQQGPPMYQGPPIHQAPPMQQPPMQQPPHMQQPPY
MQQPPHMQQSSIQIPVGPPPPKVVSTACIVPAPAPAPVPPQAAAQATPEPPSSRPPWITD
DSFANKFDPSKTTSTSRKVPALPQSAPPAPAYIPNPGSAHTPHSAPSPAYNPSPAPYNPT
PAPFNPVARGVAQRAERFAANSNRAPLCGACNNMIRGPFLVALGRSWHPEEFNCHYCHTS
LADCSFVEEQNAVYCENCYGEFFAPTCARCNTKIMGEVMHALRQTWHTTCFVCAACGKAF
GNSLFHMEDGEPYCEKDYISLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCNLN
LEGQPFYSKKDKPLCKKHAHAINV
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgagcacctacaacatttctctgagtgggccggccccatggggcttccgattgcaggga
gggaaggacttcaacatgcccctgaccatctccaggatcacccctgggagcaaggcacag
cagggcaacctgatccagggtgacatcatcgtggccatcgatggggtcagcactgagggc
atgacccacctggaggcccagaacaagatcaagtgtgccagctttaacctggccctcacc
atgcagaaatcaaagcgcccagctttgcaaagcgccaccccaagaatcgactctcccatg
caacagatccctcaccagaaggttattttcaacactcctgccaacaacgagtacgtcccc
aacttcaaccccaatgtgctgaaggacactgccctgtccacccacaagcccatcgaggtg
aagggtcctgggggcaaggccaccatcatccatgcccagtacaacacccccattagcatg
tactcccaggacgccatcatggacgccatcgccggacagtcccagtccaagggccacgag
ggcggttcgctcccagttaaagacgctcaggtagacagtgcctccccagtgtatcaggct
gtcatcaagactgcagacagggacatggagttgaatgactgggcccgcagctcctcccag
gtgcagtccaagtccttccgcctcctcgcccacatcacgggaacggagttcatgcaagac
ccagacgtggaacatctgaggaaatcaagggaaaagtttgacacagaatttaaaggccca
cgttttgcaaaattgaaaaattggcacaatggcctgtctgctcaaatccttaacgtgcca
gaaaaagccctgacacacagccctacatgggctgttggtatatatgattttcggcctcag
actgctgacggttttctctcaatgcaacctaacctcttatgcagtagccctgttgagcat
gctccagtctccatcagccccgcacctgtcgctctgcctgctagcgctgcttcgcccaat
caggtggcttcacctgctgcttcgcagtctccagagcccgcccccgtagcccctgagagc
gagcagccacccccagacacccagacacagccagtggcccctgaggcccctgcaattccc
tctgggggaccccgccacctgacgcatgcagcctcccatatctcgtctgctctgattaca
cagtctagaaacaaggtttataagcaagggccaccgcccacctctgcactggaggctctg
tcaatcaccccagtgttccgaaccagcactttgcccaaacgaaagcgcaccctgccctct
gggaaacccaagcacctgagcagctacagcctgcagcagtctgcctctggttacagctcc
cagcacaaatcctcagtctccagccaatatggccaggctccccccatgcaacaagcccct
cccatgtaccaggggcaatccatgtaccaggggcctcctatgcagcagggacctcccatg
taccaagggcctcccatgcagcagggacctcccatgtaccaggggccccccatccaccag
gctccgcctatgcagcaacctcccatgcagcagcctccccacatgcagcagcctccctac
atgcagcagcctcctcacatgcagcaaagctccatccagatccctgtgggccctccccca
cccaaggtggtcagcaccgcctgcatcgtgccagctccagcccctgcccctgttccaccc
caagccgcagcccaggccacccctgaacccccctccagcaggcccccctggattactgac
gactcttttgccaataaatttgaccccagcaagaccaccagcaccagcaggaaagtgcct
gctctacctcagagtgccccaccagcaccggcctacatcccaaaccctggctctgcccac
acccctcactctgccccaagccctgcctataaccccagccctgccccatacaaccccact
cctgcccctttcaatcccgttgcccggggtgtggcccaaagggcggagcgcttcgctgcc
aacagcaacagagcacccctctgtggggcctgcaacaacatgatcaggggacccttcctg
gtggccttgggtcgctcctggcacccagaggagttcaactgtcactactgccacacatcg
cttgcagactgcagctttgtggaggagcagaacgcagtatactgtgagaactgctacgga
gagttctttgcccccacctgtgcccgctgcaacaccaagatcatgggggaggtaatgcat
gctctgcggcagacatggcacaccacctgctttgtgtgtgctgcctgtggcaaggccttt
ggaaatagcctcttccacatggaggatggggagccctactgcgagaaagattacatttca
ctcttcagcaccaagtgccatggctgtgactttccagtagaagctggagacaagttcatt
gaagcactgggtcatacctggcacgatacctgctttgtctgtgcggtgtgcaatttgaac
ctggagggccagcccttctactccaagaaggacaagcccctgtgcaagaagcatgctcac
gcaatcaacgtgtag

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