Coregonus clupeaformis (lake whitefish): 121577003
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Entry
121577003 CDS
T08357
Name
(RefSeq) inositol 1,4,5-trisphosphate receptor type 2 isoform X1
KO
K04959
inositol 1,4,5-triphosphate receptor type 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04070
Phosphatidylinositol signaling system
cclu04114
Oocyte meiosis
cclu04210
Apoptosis
cclu04218
Cellular senescence
cclu04270
Vascular smooth muscle contraction
cclu04371
Apelin signaling pathway
cclu04540
Gap junction
cclu04621
NOD-like receptor signaling pathway
cclu04625
C-type lectin receptor signaling pathway
cclu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121577003
04020 Calcium signaling pathway
121577003
04070 Phosphatidylinositol signaling system
121577003
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
121577003
04210 Apoptosis
121577003
04218 Cellular senescence
121577003
09144 Cellular community - eukaryotes
04540 Gap junction
121577003
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121577003
04625 C-type lectin receptor signaling pathway
121577003
09152 Endocrine system
04912 GnRH signaling pathway
121577003
09153 Circulatory system
04270 Vascular smooth muscle contraction
121577003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121577003
Ion channels [BR:
cclu04040
]
Ligand-gated channels
IP3 receptor
121577003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ins145_P3_rec
RYDR_ITPR
MIR
RIH_assoc
Ion_trans
SPO22
DUF6796
Motif
Other DBs
NCBI-GeneID:
121577003
NCBI-ProteinID:
XP_041746612
LinkDB
All DBs
Position
11:complement(2388539..2533353)
Genome browser
AA seq
2666 aa
AA seq
DB search
MSDNRSSFLHIGDIVSLYAEGTINGFISTLGLVDDRCVVQPDAGDLAIPPKKFRDCLFKV
CPMNRYSAQKQFWKAKQGKQGNNDTEGDLFKKLQHAAELEQKQNDTENKKLLGEVVKYSN
VIQLLHIKSNKYLTVNKRLPALLEKNAMRVSLDPAGNEGSWFYIQPFWKLRSEGDNVVVG
DKVVLMPVNAGQPLHASNIELLDNPGCKEVNAVNCNTSWKVTLFMKFSDYREDVLKGGDV
VRLFHAEQEKFLTCDEYRNQQHIFLRTTLRQSATSATSSKALWEIEVVHYDPCRGGAGQW
NSLFRFKHLATGNYLAAEINPDFRDESVDSKTEVSQTEMNTVYSQRKRQAAEKIAYTLVS
VPHGNDIASLFELDATTLQRVDCLVPRNSYVRLRHLCTNTWVTSANFPIDTEEERPVMLK
IGTCLTKEDKEAFAIVSVPLSEVRDLDFANDANKVLESTVRQLQNGNIAQNDRRFVTKLL
EDLIFFVCEVPNNGQDVLSVVISNPNRERQKLMREQNILAQIFGILKAPFTDLGEGPMLK
LEDLGDQRYAPFKYMLRLCYRVLRHSQQDYRKNQEYIAKKFSIMQSQIGYEILAEDTITA
LLHNNRKLLEKHITAKEIETFVNLLRRNREPRFLDYLSDLCVSNKTAIPVTQELICKFML
NPANAEILIQTKLIPNMDTTLQSSVLQEDTEEDEEVWLYWIDSHKEPHGKSIRHLAQDAK
GNHKLDNDVITYYRYQLNLFAKMCLDRQYLAINQVSSQLPVDLILRCMFDDYLPYNLRAS
FCRLMLHMHVNREPQEAVVAVRYARLWTEIPSKITIHEYEYEFTDTSREEMKRKFAPTME
FVEEYLKDVVSQPFPFGDEEKNELTLEVVHLARNLVYFGFYSFSELLRLTRTLLAILDFV
QHPLTYMAELSKSPETGNNVLRTIHGVGEMMTQMVLSRGQVQPHHLPNTPPSLQDGKQPL
CLPDNEDVMVMDTKLKIIEILQFILSVRLDYRITYLLSIYKKEFGDSNLSDSSMSLSEFP
SMSVSDPDIDEIAAKAETMFAGRSECNAVELDDEGGRTFLRVLIHLIMQDYPPLVSGSLQ
LMFKHFSQRAEVLQAFKQVQLLVSEQDVENYNQIKTDLDQLRLTVEKSELWVEKSGGYGS
EDIGDSQGKEQTMEEAGILSPVQDGDVKPHIDSNKANNYNIVKEILLRLSKLCYPSKKSC
VQQQRLLKNMGAHSVVLDLLQIPYEKSDEKMNEIMTLAHVFLQNFCRGNSQNQALLHKYL
NLFLTPGLLEAETMRHIFMNNFHLCNEISDRVVHHFVHCIETHGRHVQYLKFLQTIVKAD
GKYVKKCQDKVMTELVNGGEDVLVFYNDRSSFPVLFQMMCCERERGDESGALAYHNTLVE
LLAVCTEGKNVYTELKCNSLLPLDDIVKVVTHEDCIPEVKTAYVNFVIHCYVDTEVEMKE
IYTSHHIWKLFENFLVDMARVCNSTTDRNHANVPLERYVTETVMAIVKGFFSSQFPVNNS
NLQTHQPIFIQLLQSSFRIYNCTWISSAQKNNIEGCIKTLADVAKARAIAIPVDLDSQVN
TLSLKAHTYRVERAVKDWRISARTRLRKELLGGPDYKSIIEKLQGVVACLEEQFSPMVQA
EFSVLVDVLHSPELLFPEAARLRCESGAFMSKLIKHTKKLMDKEEKLCIKILQTLREMLD
KKEAFDEPGNVLRKILLTRYFGNQRLHSKSEFGSGNSSAGGGSLVQDSDKPSSSMVDIQC
LLDSEGASELVIDLIVSTKNDRMFEESILLGNALLQGGNTQIQNSFYHQLHKQKKSEHFF
KVFYDRMRLAQQEIRATVSVNMFEVSTCRKRDEDVDVSHSGIRLRRTPKDSSLHMIDNMR
GQLKEASSATSKAFVSFRKERDTDLEVLEGQAGEGPGGVAEEREEETQMSRSITIMKPIL
RYLQLLCENHNRDLQNFLRNQNNKTNYNLVCETLQFLDIMCGSTTGGLGLLGLYINEGNV
DLVRQTLETITEYCQGPCHENQSCIAKHESNGIDIIIALIVNPVNPLGKHRLDLVLELKN
NASKLLLAIMESRHDSENAEKILYKMRPMELVNVMKEAYAQGLESEAEENALADQIKPKD
VGHNIYILAHQLARHSKFLQQSLRPPATGLLLNHDPEGEDALGYYANHTAQIEIVRHDRT
MEQIVFPVPNICEYLTEESKTRVFTTTERDDQGSKVNDFFTQFDDLYNEMRWQKKIRNNL
ALFWFSRHISLWGSISFYLAVLVNVAVALFYPFGDDEDEGILPPFLSILLWVALVVCTTM
LFILPKPGSVRPFLVSVILRSIYTLGLGPTLLLLGAANLLNKMVFLVSFVGNQGTFTRGY
KPVVMDMPFLYHVGYVIVCMLGLFVHEFFYSFLLFDLLNREETLLNVIKSVTRNGRSIVL
TAVLALILVYLFSIVGFLFLKDDFRMDVQRLSVMAGEDDGTERVCDTLLMCIVTVLNQGL
RNGGGVGDVLRKPSKDDPLFVARVVYDLLFFFIVIIIVLNLIFGVIIDTFADLRSEKQRK
EEILKTTCFICGLERDKFDNKTVSFEEHITSEHNMWHYLYFLVLVRVKDPTEYTGPESYV
AQMIKEMNLDWFPRMRAMSLVSSEGETEQNEMRSLQEKLDGTVKLVSLLSSQLYELKEKM
TEQRKNKQRLGFLGTHGVNNHHIPAH
NT seq
8001 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaacagatctagttttcttcatattggagacattgtgtcgctttacgcggaa
ggcactatcaatggcttcatcagtacattggggcttgttgatgacaggtgtgtggtgcag
ccggacgcaggagacctggccattccgcccaaaaagttcagagactgcctgttcaaggta
tgtccgatgaacaggtactcagctcagaagcagttctggaaggccaaacagggcaaacaa
ggcaacaatgacacagaaggagacctattcaagaagttacagcatgcagcagaactggaa
cagaagcaaaatgacacagagaataagaagctgctgggagaggtggtcaagtacagtaat
gtcatccagcttctgcatataaaaagtaacaagtacctgacagtgaacaagcgtctgccg
gcgctgctggagaagaacgccatgcgtgtgtctctggacccagccggcaatgagggctcc
tggttctacatccagcccttctggaagctccgcagcgagggcgataatgtggtggtgggg
gacaaggtggtcctgatgcctgtgaacgcagggcagcctctccatgccagcaacattgag
ctgttagacaaccccggctgcaaggaggtgaacgctgtgaactgcaacaccagctggaag
gtcactctgttcatgaagttcagtgactacagagaggacgtcctcaaaggaggtgatgtg
gtgcgtctgttccacgccgagcaggagaagttcctgacatgtgacgagtacaggaatcag
cagcacatcttcctcaggactaccctgcgacagtctgctacctccgccaccagttccaaa
gcactctgggaaatagaggttgtgcactacgacccctgcagagggggtgccggccagtgg
aacagcctgtttcgtttcaaacacctggccactgggaactacctggcagcagagattaat
cctgatttccgggatgagagtgtggattctaaaacagaggtgagtcagacggagatgaat
acagtgtactcccagaggaagcgtcaggctgcagagaagatagcctacaccctggtgtct
gtgccccatggcaacgacatcgcctctctgtttgagctggacgccaccacactgcagagg
gttgactgtctggtgcccaggaactcgtacgtacgactgagacacctgtgtaccaacacc
tgggtgactagcgccaactttcccatcgacactgaggaggagcgccccgtcatgctcaag
attggcacgtgccttacgaaggaggacaaggaggcatttgccattgtctctgtgcccctg
tctgaggtccgagacctggactttgctaacgatgccaacaaggtcctggagtcgaccgtg
aggcagctgcagaacggcaacattgctcagaacgataggaggtttgtgaccaagctgttg
gaggacctgatcttctttgtgtgcgaggtccccaacaacggtcaggacgtactgtctgtg
gtcatctccaacccaaacagagagaggcagaaactaatgagggaacagaacattctagcc
cagatttttggtattctgaaggccccgttcacagacctgggggagggtcccatgctgaag
ctggaggacttgggggaccagcgctacgctccctttaagtacatgctgcggctgtgctac
cgagtgttgcgccactcccaacaagactaccgcaagaatcaggagtacatagccaagaag
ttctccatcatgcagtctcagatcggttacgagatcctggctgaggacaccatcactgcc
ctgctccacaacaaccgcaagctgctggagaaacacatcacagccaaggagatcgagacc
ttcgtcaatctgctgcgacgcaaccgagagcccaggtttctggactacctgtcagacctg
tgtgtgtccaataagacggccatcccagtgacacaggagctcatctgtaaattcatgctg
aaccccgccaacgctgaaatcctcatccagaccaagctcatccccaacatggatacaacc
ctgcagtcgtccgtgctgcaggaggacaccgaggaggacgaggaggtgtggctctactgg
attgacagccacaaggagccacacggcaagtccatccgccacctggcccaggacgccaag
ggcaaccacaagctggacaacgacgtcatcacctactacagataccagctcaacctgttt
gccaagatgtgtctggaccgccagtacttggctatcaaccaggtgtccagccagctgcct
gtggacctgatcctgcgctgcatgtttgacgactacctgccctacaacttgcgagcctcc
ttctgccgcctcatgctgcacatgcacgtgaaccgcgagccccaggaggccgtggtggcc
gtgcgctacgcccgcctctggaccgagatcccctccaagatcaccatccacgagtatgag
tatgagttcactgacacctccagagaggagatgaagaggaagtttgcccccaccatggag
tttgtagaggaatacctcaaggacgtggtcagccagccctttccctttggagacgaagag
aagaatgaactgactctggaggtggtgcacctggcccgtaacctggtttattttggcttc
tacagcttcagtgagctgctgcgtctcacgcgcaccctgctggccatcctggactttgtc
cagcacccactcacctacatggccgagctcagcaagagccccgagacagggaacaatgtg
ttgcgtaccatccacggcgtgggggagatgatgactcaaatggtgctgagtagagggcaa
gtccagcctcaccacctcccgaacacgcccccgtccctccaggatggaaaacaacctctc
tgtctgcccgacaacgaggatgtcatggtcatggacaccaagctcaaaatcattgagatc
ctacagttcattctgagtgtgcgactggactataggatcacctacctgctgtccatctat
aagaaagagtttggggacagtaatctatcggacagttctatgtcattatctgaattcccc
tcaatgtcagtttcagatccagacattgatgagattgcagcaaaagcagagaccatgttt
gctggaaggtcagagtgtaatgctgtggagctggatgacgagggaggcaggacctttctg
agggttctgatccacctcatcatgcaggactaccccccgctggtgtccggctcgctgcag
ctcatgttcaaacacttcagccagagagccgaggtcctacaggccttcaaacaggtccag
ttgctggtgtcggagcaggatgtggagaactacaatcagatcaagaccgacctggaccag
ctcaggctgactgtggagaagtctgaactgtgggtggagaagagtggaggctacggcagt
gaggacataggagacagccagggcaaggagcagaccatggaggaggcggggatcctgagt
ccagtacaggatggggatgtgaagccccatatagacagcaacaaagccaacaactacaac
atcgtcaaagagatcctgctgcggctcagtaagctgtgttaccccagtaagaagagttgt
gtgcagcagcagaggctactgaaaaacatgggggctcactctgtggtgctggacctgctc
cagataccttatgagaagagtgatgagaagatgaatgagatcatgacactggcccatgtg
ttcctgcagaacttctgtagagggaacagccagaaccaggctctgctccacaaatacctc
aacctgttccttacaccagggctcctggaggctgagaccatgcgccacatcttcatgaac
aacttccacctgtgcaacgagatcagcgaccgcgtggtccaccattttgtccactgcatc
gagacgcacggccgacacgtccagtacctcaagttcctccagaccatcgtcaaggccgac
gggaagtacgtgaaaaagtgccaggacaaggtcatgaccgagctggtgaacggtggcgag
gacgtgctggtgttctacaacgaccgctcctccttcccggtgctgttccagatgatgtgc
tgcgagcgggagcgtggggacgagagcggcgccctggcctaccacaacaccctggtagag
ctcctcgccgtctgcaccgagggcaagaacgtctacaccgagctgaaatgtaactccctg
ctgcccctcgacgacatcgtcaaagtggtcacccacgaagactgcatccctgaggtgaag
acagcctacgtgaactttgtgatccactgctacgtggacacagaggtggagatgaaggag
atctacaccagccaccacatctggaagctctttgagaacttcctggtggacatggcacgg
gtgtgcaacagcaccacagaccgtaaccatgccaacgttcccttggagaggtacgtgacg
gagacagtgatggccatcgtcaagggcttctttagctcccagttccctgtcaacaactcc
aacctgcagacccaccagcccatcttcatccagctgctccagtcctccttcaggatctac
aactgcacctggatcagctcagcccagaagaacaacatcgagggctgcatcaaaacactg
gctgacgtggccaaggcgcgtgccatagccatcccggtggatctggacagccaggtgaac
actctgtctctgaaggcccacacctacagggtggagcgtgctgtcaaggactggaggatc
tccgcacgcacccggctccgcaaggagctcctgggagggcctgactacaagagcatcatc
gagaagctgcagggtgtggtggcgtgtctagaggagcagttcagtcctatggtgcaggct
gagttctctgtgttggtggatgtactacatagccctgagctgctgttcccagaggctgcc
agactgcgctgtgagagtggggccttcatgtccaaactgatcaaacacaccaagaagctg
atggacaaggaggaaaagctgtgcattaagatcctgcagacactcagagagatgctggac
aagaaggaggccttcgatgagcctggaaacgtgttaaggaagattctcctcactcgctac
tttggaaatcaaaggcttcactccaaatcagagtttgggagcgggaacagctcagctgga
ggtggctctttggtgcaggactctgacaagccgagcagcagcatggtagatatccagtgt
ctgctagacagtgagggagcctcagagctggtcatagaccttatcgtcagcaccaagaac
gaccgcatgttcgaggagagcatcctgctaggcaacgccctgctccaggggggaaacact
cagatacagaactcattctaccaccagctgcacaagcagaagaagtcggagcacttcttc
aaggtgttctacgaccgcatgcgtctggcccagcaggagatccgggccactgtgtccgtc
aacatgttcgaggtcagcacctgcaggaagagagacgaggacgtcgacgtcagtcacagt
ggcatccggctcaggagaacaccaaaagactcttccctgcacatgatagacaacatgcgt
ggccagttgaaggaggcgtcctcggccacctccaaggcctttgtctccttccggaaggag
cgggacacggacctggaggtgctggagggccaggccggtgaggggcccgggggagtggcc
gaggagagggaggaggagacccagatgagccggtccatcaccatcatgaagcctatcctg
cgatacctgcagctgctctgtgagaaccacaacagggacctgcagaacttcctgcggaac
cagaacaacaagaccaactacaacctggtgtgtgaaactctgcagttcctggacatcatg
tgtggcagcaccactggaggcctgggcctgctgggactctacatcaatgagggcaacgtg
gacttggtccggcagaccctggagaccatcacagagtactgccagggaccctgccacgag
aaccagtcctgtatagccaagcacgagtctaacggcatcgacatcatcatagctctaata
gtcaaccccgtcaaccctttagggaagcatcgactggacctggtgctggaactcaagaac
aacgcctccaagctgctgctggccatcatggagagtcgccatgacagtgagaacgcagag
aagatcctttacaagatgaggcccatggagctggtgaatgtgatgaaggaggcatatgcc
caggggctggaaagtgaggctgaggagaacgctttagcagaccagatcaaacctaaagac
gtgggacacaacatctacatcctggcccaccagctggccagacacagtaagttcctgcaa
cagagcttgaggccgccagcgacggggctactgctgaaccatgacccagagggagaagac
gccctcggttactatgctaaccacaccgctcagatagagattgtgcgtcacgaccgcaca
atggagcaaatagtgttcccggtgcccaacatctgtgagtacctgacagaggagtccaaa
acacgcgtgttcaccaccaccgagagggacgaccaaggcagcaaggtcaatgacttcttc
acgcagttcgacgacctctacaacgagatgcgctggcagaagaagatacgcaataacctg
gctctgttctggttctctcggcacatctctctgtggggaagcatctctttctacctggcc
gtactggtcaatgtggccgtggctctcttttaccccttcggtgacgacgaagatgaaggc
atccttcccccctttctgtccatcctgctgtgggtggcgttggtggtgtgtaccaccatg
ctcttcatccttcccaaaccagggagtgtccggcccttcctggtctctgtcatactgcgc
tctatctacacactgggcctcggccccaccctgttgctactgggggccgccaacctcctc
aataagatggtgttcctggtgagcttcgtgggcaaccagggaacgttcacgcggggctac
aagccggtggtcatggacatgcccttcctctaccacgtgggctatgtcatcgtctgtatg
ctgggcctcttcgtccacgagttcttctacagcttcctgctctttgacctgctgaaccgt
gaggagaccctgctgaacgtgatcaagagtgtgacgcgtaatgggcgctccatcgtcctc
acggctgttctggccctcatccttgtctacctcttctccatcgtgggcttcctcttcctc
aaggacgacttccgcatggacgtgcaacgtctgtcagtgatggcgggggaggacgatgga
acagagcgtgtgtgtgacactctgctgatgtgtatcgtgacggtgctgaaccagggcctg
aggaacggagggggagtgggagacgtgctgaggaagccctccaaagacgatcctctgttt
gtggcccgtgtggtgtatgacctgctgttcttcttcatcgtcatcatcatcgtcctcaac
cttatcttcggcgtcatcatcgatacgttcgccgacctgaggagcgagaagcagaggaag
gaggagatactgaagaccacctgcttcatctgtgggttggagagggataagtttgacaac
aagacggtgtcctttgaggagcacatcacgtcggaacacaacatgtggcactacctgtac
ttcctggttctggtgagggtgaaggaccccacggagtacaccggcccagagagctacgtg
gcccagatgatcaaggagatgaacctggactggttcccccggatgcgggcgatgtctctg
gtgagcagcgagggggagactgagcagaatgagatgcgctccctacaggagaaactggac
ggcaccgtcaaactagtgtccctgctgtcctcccagctgtacgagctaaaggagaagatg
acagaacagaggaagaataaacagaggctgggcttcctggggactcatggagtcaacaac
caccatatcccagcacactga
DBGET
integrated database retrieval system
