Coregonus clupeaformis (lake whitefish): 121577006
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Entry
121577006 CDS
T08357
Name
(RefSeq) class E basic helix-loop-helix protein 41
KO
K03730
class B basic helix-loop-helix protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121577006
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121577006
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
121577006
NCBI-ProteinID:
XP_041746615
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Position
11:complement(2347551..2351591)
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AA seq
431 aa
AA seq
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MDERIPRLQDRQFIDHDNFLGVEYSSLYMCKSKRGLKREDGKDAYKLPHRLIEKKRRDRI
NECIGQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLNALTAVTEQQHQKIIALQNDACFP
RDRSMKTSIHADLDAFHSGFQACAKEVLQYLNKFENWNMREQRCAQLINHLHKVSAQFQP
GAPLLNPQLPAGDVQERDSQKVESQAGHDRVSVIQRSHAELNENDTDTDSGYGGEAEKND
GNKGCDRSKAVKIKQEFGDDRAAKKPKMNWAGNSTTGADTTTRPDLAFINSLMGITGVGQ
QTPFCMPFYLINPSAAATYMPLFDKSNLEKFVYPAAAAAALSSPFPWLYPSLNSHPSATA
AAAAAAGAFSGMSTEKSSGFGSNSKHSLSDDSDMSNVAEPGSPEEREDNPENDDYDDDDD
DDDIRERLPRQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagaataccgcgtctgcaagacagacaatttattgatcatgacaatttctta
ggggtggaatactcctcactctacatgtgtaaatcgaaaagaggactgaagcgcgaagat
ggcaaggacgcgtacaagttaccacaccgactgatagagaagaagaggagagacagaatc
aatgaatgtatcggacagctgaaggatttgttacccgaacatctcaaactgacgacgctc
gggcatttggagaaagcagttgttctcgagttaactttgaagcatttaaacgctttgact
gcagtcactgagcaacaacaccagaagattattgctttgcagaatgatgcatgttttcca
cgggatcgatctatgaagacgtccattcacgctgatttggatgcgttccactcggggttc
caagcatgtgccaaagaggtcctgcagtacctcaacaagttcgagaactggaatatgcgc
gagcagcggtgcgcgcagctcatcaaccacttgcacaaagtatctgcgcagtttcagccc
ggtgcgccattgctcaatccccagctacctgccggagacgtgcaggagcgtgatagccag
aaagtggaaagccaagccggacatgaccgcgtatcggtcatacagaggagccacgcggag
cttaacgagaatgacacagacacagacagtggatacgggggtgaggcggaaaagaacgat
gggaataaaggatgtgaccgtagcaaagcagtaaagataaagcaggagttcggggatgac
cgcgctgccaaaaaaccaaagatgaactgggctggaaacagcacgacgggcgcagacacg
accaccagacctgatctggcctttattaactctttgatgggaataactggcgtgggacag
cagactccattttgcatgccattttacttaatcaatccctcggcagcagcgacctacatg
ccgctattcgacaaaagtaacctagagaagtttgtgtaccctgctgcggcagcagcagct
ctctcttccccgtttccatggttataccccagccttaactcacacccgtcggcaactgcg
gccgctgctgctgccgcaggtgctttctccggcatgtcgacagagaagagctctggattc
ggttccaactccaagcactctctctctgacgacagtgacatgtcaaacgtggcagagccg
ggctcacctgaggagagggaggacaaccctgagaatgatgattatgatgatgatgatgat
gatgatgatattagggaacgactccccagacaatga
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