Coregonus clupeaformis (lake whitefish): 121577012
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Entry
121577012 CDS
T08357
Name
(RefSeq) DNA polymerase subunit gamma-1-like
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121577012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121577012
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121577012
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121577012
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
121577012
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
121577012
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
121577012
NCBI-ProteinID:
XP_041746626
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All DBs
Position
11:1386944..1398883
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AA seq
1203 aa
AA seq
DB search
MLHLLRLRPFRRPLSSVLWRTLCCTSYSTQQPHSLQGSLPPETRRNPLNIQMLSQNLHEQ
IFRGAEQEYEDEKVERSIRHLQRHQLWGKESSLLPGVELQLPHMYGEDINGHFRILAQKQ
SLPYLEAASKLQQAPLPPMPQDWVWDVGWMRYGPGGEARRVDFPDEAGLVFDVEVCMAEG
HCPTLAVAVSPTAWYSWCSKRLIEERYSWSSQLTPADLIPMETPTNSSRPPGGQWRERLI
VGHNVSFDRSYIKEQYLLKGSKARFLDTMSLHMAISGLTGFQRTLWMANKHGKRRGLLEV
KEHMKKVGRPGRKEGPMIGSWDWVNISSINNLADVHALYVGGEPLQKEAREIFVKGSMAD
VRNNFQELMQYCALDVQATHQVFCEQLPLFMERCPHPVTFAGMLEMGGCYLPVNQNWGRY
LEDSQDTFEELQREMKKSLMSLADDACQLLQDDRYKEDAWLWDLEWDVQEFKQKKVTVSK
RKRSEAEPAPSTPLRDWDQDPGPPTEEEMAGPCPSREALERLKEMVSRLPKRRQHLPGHP
GWYRKLCVKMSEEESWSPGASLISLAMRVTPKLMGLTWDGFPLHYTELHGWGYLVPGRRD
NLMEPQGEEEDATEPVCPHKAIESVYREYCEQKGKEQPRCLDNGLSDDLMLTDSTLWQTV
EELGRLESVSEEENGGRVMRKRNKEMQDVNSLPGESHCPYHHGNGPYNDVNFPGCWFFKL
PHKDGNDNNVGSPFSKDFLSKMEDGTLRAGRGGTNATRALEINKMISFWRNAQKRISSQK
VVWLRKGELPRAVSRHEEYDEEGQYGAILPQVVTAGTVTRRAVEPTWLTASNARRDRVGS
ELKAMVQVPPGYHLVGADVDSQELWIAAVLGEAHFAGMHGCTAFGWMTLQGKKSQGTDLH
SRTADTVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLSQPEAASKARQMYALTKGL
RRYRLSEEGEWLLKELDVEVERDEDGSVSLQELRRITRLASQSSRRRKWEVAGQRLWAGG
TESDMFNKLESIALSAQPATPVLGCRISRALEPQAVKDEFITSRVNWVVQSSAVDYLHLM
LVAMRWLMEEHDIDGRFCISIHDEVRYLVCSEDRYRAALALQITNLLTRCMFAHALGMQD
LPQSVAFFSAVDIDQCLRKEVTMDCVTPSNPTGLERRYGLPQGEALDIYQIIDITKGSLG
KGR
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatcttctgcgtcttcgtcccttccggaggcctctctcctctgtcctttggagg
acactatgctgcacctcctactccacccagcagccccactccctccagggctccctcccc
ccagagacccgccggaaccctctcaacatccagatgctgtcccaaaacctccatgagcag
atcttccgcggcgcagagcaggagtacgaggacgagaaggtggagcggagcatcaggcac
ctgcagaggcaccagctgtggggaaaagaatcctccctgctgcctggtgtggagctccag
ctgccccacatgtacggggaggacatcaacggccacttccgcatactggcccaaaagcag
agcctaccctacctggaggctgccagtaagctccagcaggccccgctgccccccatgccc
caggactgggtgtgggatgtgggctggatgcgctacgggccgggtggggaggccagacgg
gttgacttcccagacgaggcaggcctggtgtttgacgtggaggtgtgcatggcggaggga
cactgtcccacgctggctgtggccgtgtcccccactgcctggtactcgtggtgcagcaag
cgtctgatagaggagagatactcctggtccagccagctgacccctgctgacctcatcccc
atggagaccccaaccaactccagccgccctccgggaggccagtggagggagagactgatt
gtgggccacaacgtcagctttgaccggtcttacatcaaggagcagtacctgctgaagggt
tctaaggctcgttttctggacaccatgagtctccacatggccatctctggtctgactggg
ttccagcgcacgctgtggatggccaacaagcacggcaagaggcgtggcctcctggaggtc
aaagagcatatgaagaaagtgggccggcctgggcggaaggaagggcccatgatcggctca
tgggactgggtgaatatcagcagcatcaacaacctggctgatgtgcatgctctgtatgtg
ggaggggagccactgcagaaggaggccagagagatcttcgtgaagggcagcatggctgac
gtcaggaacaacttccaggagctgatgcagtactgcgctctggacgtccaggccactcac
caggtgttctgtgagcagctgccgctcttcatggagaggtgccctcatccagtgacgttt
gcagggatgctggagatgggcgggtgctacctacctgtcaatcagaactgggggcggtac
ctggaagactctcaagacacgtttgaggagctgcagagagagatgaagaagagtctgatg
agtcttgcggacgacgcttgtcaactgctgcaggatgacaggtataaggaggacgcctgg
ctttgggatctggaatgggatgtccaggagttcaagcagaagaaggtgaccgtcagcaag
agaaaacgctccgaggctgagccagcacccagcacaccactgagagactgggaccaggac
ccaggtccccccactgaggaggagatggcagggccgtgcccaagtagggaggctctggag
aggctgaaggagatggtcagccggctgcccaagaggagacagcacctgcctggacatcct
gggtggtatcgtaagttgtgtgtgaagatgtcggaggaggagagctggtcgccgggggcc
agcctgatcagtctggcgatgcgggtgactcccaagctgatggggctgacatgggatggc
tttcccctgcactacacggagctgcacggctggggctacctggtgcctggccgcagggac
aacctgatggagccccagggggaggaggaggacgccacggagcctgtgtgcccccacaag
gccatagagagtgtgtacagagagtactgtgagcagaaaggtaaagagcagcctaggtgt
ctggacaacggcctctctgatgacctcatgctgaccgacagcacactgtggcagacggtg
gaggagttgggtcgcttggagagtgtgtcagaggaggagaacggtggcagggtgatgagg
aagagaaataaggaaatgcaggatgttaattctctaccaggtgagagtcactgcccctat
caccatggaaacggaccttacaatgatgtcaactttccgggctgctggtttttcaaactc
ccacacaaggatggaaatgacaacaacgtgggcagccccttctccaaggacttcctgtcc
aagatggaagacggcaccctgagggcagggagggggggcaccaacgccacccgggctctg
gagatcaacaagatgatctctttctggaggaatgcccagaaacgcatcagctctcagaag
gtggtgtggctgaggaaaggggagctccctcgcgctgtcagcaggcatgaagagtatgat
gaggaggggcagtatggcgccatcttgccccaggtcgtcaccgcgggaacagtcacccgc
agggctgtggagccaacgtggctgactgccagcaacgctcggcgggatcgagtgggcagt
gagctgaaggccatggtacaggtgccccctgggtaccacctggtgggggcggacgtggac
tcccaggagctgtggatcgctgccgttctgggagaggcccacttcgctggcatgcatggc
tgcacagcgttcggctggatgaccctgcagggtaaaaagagccagggcactgacttgcac
agccgcacggctgacacggtgggcatcagccgcgagcatgccaaggtcttcaactacgga
cgcatctacggcgctgggcagcccttcgccgagcgcctgctcatgcagttcaaccaccgc
ctcagccagccagaagccgccagcaaggcccggcagatgtatgccctcaccaagggccta
cgcaggtaccgtctgtctgaggagggtgagtggctgctgaaggagctggatgtggaggtg
gagagggacgaggacgggagcgtctccctgcaggagctccgccggatcaccagactggcc
tcccagagttctcggaggaggaagtgggaggtggcgggccagcgtctgtgggctggtggt
acggagtcagatatgttcaacaagctggagagcatcgccctctcagcccagccggccacc
cccgtcctgggctgcaggattagcagagccctggagcctcaggccgtcaaggacgagttc
atcaccagcagggtgaactgggtggtgcagagctcggcggtggactacctccacctgatg
ctggtggccatgcgctggctgatggaggagcacgacatcgacggacgcttctgcatcagc
atccacgacgaggtgcgctacctggtctgcagcgaagaccgctaccgggcagcactggcc
ctgcagatcaccaacctgctcacaaggtgtatgtttgcccatgcactgggcatgcaggac
ctgccccagtcagtggccttcttcagtgccgtggacattgaccagtgtctgaggaaggag
gtgaccatggactgtgtgactccctccaaccccacagggctggagcgcagatacggcctc
ccacagggtgaggctctggacatataccaaatcatcgacatcaccaaaggctctctgggg
aaagggagataa
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