Coregonus clupeaformis (lake whitefish): 121577067
Help
Entry
121577067 CDS
T08357
Name
(RefSeq) shaker-related potassium channel tsha2
KO
K04879
potassium voltage-gated channel Shaker-related subfamily A member 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121577067
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121577067
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121577067
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
121577067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
BTB_2
Ion_trans_2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121577067
NCBI-ProteinID:
XP_041746743
LinkDB
All DBs
Position
11:complement(50227180..50230189)
Genome browser
AA seq
483 aa
AA seq
DB search
MTVVSRENQDETVVVAPLYQDDCDVELGDQECSERVVINISGLRFETQLKTLARFPSTLL
GDPRKRMRFFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVTMDIFMEEITFYEIE
EEAIEMFKEDEGMIREVERPMPDNEFQRHMWLLFEYPESSGPARMIAVVSVSVILISIVI
FCLETLPRFREDHSTDIQLSNHLTKNGTTQHKKNNLLTDPFFIVESLCIVWFSFEFLMRF
LSCPSKPGFFKNAMNVIDILAIAPYFITLGLDLAELQGPGSEQATSLAILRVIRLVRVFR
IFKLSRHSKGLQILGQTLNASISELALLIFFLLIGVILFSSAAYFAEADDPESGFTSIPA
AFWWAVVSMTTVGYGDMCPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRERND
EETAVYTHVTCGQQNASFGEFKSTSDSKQSLDKSEYIEDDSFETIRFTNFSPFEHYTGKL
TDV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgtatcccgtgagaaccaggacgagactgtggtagttgctcccctgtaccaa
gatgattgcgacgtggagctgggcgatcaggagtgtagcgagagggtcgtcatcaacatc
tccgggctgcggttcgaaactcaactgaagaccctcgcgcgctttccctctacactcttg
ggagacccacgtaaaaggatgcgcttcttcgatcctttgagaaatgagtactttttcgac
aggaatagacccagctttgatgccatcctttattattaccagtctggaggaaggcttagg
agacctgtcaacgttaccatggacattttcatggaagaaataacattttatgaaatcgaa
gaggaggccatagagatgttcaaagaagatgaaggtatgatcagagaggtggaacgtccg
atgcctgacaacgagtttcagcgccacatgtggttgttgtttgagtacccggagagctcg
gggcctgcccggatgatcgctgttgtatcagtcagtgtgattttgatatccatagtgatc
ttctgtttggagactttgccacggttcagggaagatcacagcacagacatacaactcagt
aatcacctcaccaagaatgggactactcaacacaaaaaaaacaatctgttgacagacccg
tttttcatagttgagtcactttgcatcgtgtggttttcctttgaatttctcatgaggttt
ttatcgtgccccagcaaaccgggtttcttcaaaaacgccatgaacgtcatcgacatctta
gcgattgctccttatttcatcacccttggccttgacctcgcagagctacagggaccggga
agcgagcaggccacgtcgttagccatactcagagtcatccgtttggttcgagtcttcagg
attttcaaactttccaggcactccaagggtctccaaatcttgggtcagacactcaacgcc
agcatcagcgaactagcgcttttgatattctttcttctcataggggttattctgttctcc
agcgccgcttactttgcagaggcagacgaccctgaatcgggattcacgagtatccccgcc
gcattttggtgggcggtggtgtccatgactacggttggatatggagacatgtgcccagtt
actattggcggcaaaatagtgggatctttgtgtgccatcgccggagtgctgaccatagcc
ctacctgtccctgtcatcgtttccaattttaattacttctatcacagagaacgtaatgat
gaggaaaccgccgtgtatacccacgtgacttgtggtcaacagaacgcttcatttggggaa
ttcaaatcgaccagcgacagcaaacagtccctcgacaaatcagagtacattgaagatgat
tctttcgagactatcagatttactaacttcagcccatttgaacattacactggcaagctg
acggatgtatga
DBGET
integrated database retrieval system
