Coregonus clupeaformis (lake whitefish): 121577077
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Entry
121577077 CDS
T08357
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121577077
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121577077
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_10
DUF6173
Motif
Other DBs
NCBI-GeneID:
121577077
NCBI-ProteinID:
XP_041746765
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Position
11:50708392..50767590
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AA seq
548 aa
AA seq
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MLEHSSELALVQSLYVNSMRCPPSASSAGVPVRNEDLGSLSNGSNSSKMNGSMENLDTPD
HDSIKMFVGQIPRSWTETELKELFEPYGAVHQINILRDRTATPPQSKGCCFVTFYTRKAA
LEAQNALHNIKTLTGMHHPIQMKPADSEKTNAVEDRKLFIGMVTKKYGENEVRMMFSAFG
QIEECRILRGPDGLSRGCAFITFSTRAQAANAIKTMHHSQTMEGCSSPMVCKFADTQRDK
EQRRLQQQMAQQMQQLNSASTWGNLAGLGGLTPQYLALLQQATSTGNQSNFGGMQRLGGV
NQLQLQNLATLAAAASAAQNSGGGSNALSANGALGNLYNSAAGQTASSSASAAMNTLASL
GLTQGLGGGLTGASMGLNNLNALTGGVSGEYSNRMAAMNGGLGASMANGSGASSMDALTQ
AYSGMQQYTASALPSLYSQSLLQGAAGGSQKEAGSQREGPEGANLFIYHLPQEFGDQDVL
QMFMPFGSVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKR
SKNDSKPY
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacactcgtcggagctagccctggtgcagagcttatacgtcaacagcatgcgt
tgtcccccctctgcctcctccgccggtgtccccgtcaggaatgaggacctaggatctctg
agcaacggcagcaacagcagcaagatgaatggttccatggagaacctggatacccctgac
catgactccatcaagatgttcgttggccagatcccccgctcctggacggaaacggagctc
aaggagctgttcgagccctacggggccgtgcaccaaatcaacatcctccgagaccgcact
gccacacccccccagagcaaaggatgctgttttgtaacgttttataccagaaaagccgcc
ctggaggcccagaatgcattgcacaatataaagaccttaacagggatgcatcatcccatc
cagatgaaacccgctgacagcgagaaaacaaatgcggtggaagacagaaagctcttcatt
ggaatggtgacaaagaaatacggcgagaacgaggtccggatgatgttctctgctttcgga
cagatagaggaatgccgaattctcagaggacccgacggtctgagcagaggctgtgccttt
atcacattttctaccagggctcaggccgcgaatgcaatcaaaaccatgcatcactctcag
actatggagggctgctcctctcccatggtgtgtaagtttgcggacactcagagggacaag
gagcagcggcgcctgcagcagcagatggcccaacagatgcagcagctcaacagcgcctcc
acctggggaaacctggcagggctgggaggcctcacaccacagtacctggcattgctccaa
caggcgacatctaccggtaaccagagtaattttggtggcatgcagaggctaggaggtgtg
aaccagctgcagctgcagaacctggccacgttagcggctgccgcctctgcagcccagaac
tcaggcggcggctccaacgccctgtcagccaacggagctctaggtaatctctataactca
gcagcaggccagacggcaagctccagtgcgagtgcagccatgaacactctggcctctctg
ggcctgacccagggcctcggcgggggcctgacgggggcctccatgggtctcaacaacctc
aacgccctcactgggggtgtcagcggtgagtactccaaccgtatggcggctatgaacgga
ggactgggggcctctatggcaaacggctcgggggcgagctccatggatgccctgactcaa
gcctactcagggatgcagcagtacacggcctctgctctgccttccctctacagccagtcc
ctactgcagggagcagccggcgggagccagaaggaggccgggagccagagggagggtcct
gagggagccaacctgttcatttaccacctgccccaggagtttggagaccaggatgtcctt
cagatgttcatgcctttcggaagtgtcgtctctgccaaagtcttcatcgacaaacagacc
aatctgagcaagtgcttcgggtttgtcagctacgacaatccggtgtcggcgcaggccgcc
atccaggccatgaacggcttccagatcggcatgaagaggctcaaggtgcagctgaagcgc
tccaagaacgacagcaaaccctactga
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