Coregonus clupeaformis (lake whitefish): 121577079
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Entry
121577079 CDS
T08357
Name
(RefSeq) probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial
KO
K15791
2-oxoadipate dehydrogenase E1 component [EC:1.2.4.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310
Lysine degradation
cclu00380
Tryptophan metabolism
cclu00785
Lipoic acid metabolism
cclu01100
Metabolic pathways
cclu01210
2-Oxocarboxylic acid metabolism
Module
cclu_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121577079
00380 Tryptophan metabolism
121577079
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
121577079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121577079
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121577079
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
Motif
Other DBs
NCBI-GeneID:
121577079
NCBI-ProteinID:
XP_041746776
LinkDB
All DBs
Position
11:50781050..50820210
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AA seq
921 aa
AA seq
DB search
MSALLFLKNLHCISVARPVVGCLYHTEKGVYGYRPKQTEGDPKLQSDHIAALNQDHGLMR
LVEAYRAHGHKAAKINPLLPEDPVEDTVPEINMLTGAVQGPLNTSGLRHFGKAEASVEEV
LAYLEEAYCGRISIETSQLTRLEEREWLADRFEELKKETFTAEERKKLAKLMLESQEFDH
FLATKFSTVKRYGGEGAESMMGVFYEIFRLSAHSGVTDIVMGMPHRGRLNLLTGLLQFPP
ELMFRKMRGLSEFPADSPSIGDVLSHLTSSVELDFGTAHPLKVTMLPNPSHLEAINPVTQ
GKTRARQQLKQEGDYSPDENAQPGDKVVCLQVHGDASFSGQGIVPETFTISLLPHFRVGG
SIHLIVNNQVGYTTPSARGRSSLYCSDVGKMVGCAVIHVNGDDTEEVVRATRLAVEYQRR
FRKDVILDLLCYRQWGHNELDEPGFTNPAMYRIIRSRKSIPDSYADQLISEGLMTEEERG
AIRTAHYGMLNDKLANMTLYSPAPTNLQGRWGGLVEPQARVTHWDTGVPAPLLQYVGAKS
VEIPDEVQLHSHLGKMHVAGRRAKVENGTNLDWSTAEAMAFGSLLCQGFNIRISGQDVGR
GTFSQRHAMIVCQDTDDMYIPLNHIDPEQKGFMEVCNSALSEEAVLGFEYGMAIAQPKLL
PIWEAQFGDFFNGAQIIFDTFLSGGEAKWLLQCGLVILLPHGYDGAGPEHSSCRMERFLQ
LCDSKEEGVDGDNVNMGVVNPTTPAQYFHLLRRQMIRNFRKPLIVAGPKTLLRFSGATSS
LADMAPGTSFKPVIGDTAVTPASVQQVVLCSGKHYYALLKQREASAATQNTALIRLEELC
PFPLEALQQELTKYTNAKEFVWSQEEPQNMGPWSFVARRFEKQLACKLRLVSRPALPAPA
VGIGTLHHQQNEAILTATFSS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgctactattcttgaaaaacttgcactgcataagcgtcgcgcgcccggtcgtc
ggttgtctgtatcacaccgaaaaaggagtctacggttaccgacccaaacaaaccgaaggg
gacccgaagttgcagagcgaccatatcgctgcacttaatcaagatcatggtctcatgcgc
ctggtggaggcttaccgagcacatggacacaaggctgctaaaattaaccctctactgcca
gaggacccagtggaggacaccgtgccagagatcaacatgttgactggggctgtacaagga
cccctcaacacatctggactgcgtcactttggcaaggctgaggcgtcggtggaggaggtg
cttgcctacctggaggaggcctactgtggccgcatttccatagagaccagtcagttgacc
agactggaggaaagggagtggctcgccgaccgcttcgaggagttgaagaaggagacattt
acggcggaggagaggaagaagctggccaaactcatgctggagtcacaggagttcgatcac
ttcctggccaccaagttttccacggtgaagcgttacggtggtgagggagcagagagcatg
atgggagtgttctatgagatcttccgcctgtcggcccacagtggggtgacggatatcgtc
atggggatgcctcaccgcgggcgactcaacctcctcacggggctgctgcagttcccacca
gagctgatgttccgtaagatgcgtggcctcagtgagttcccagcggactctccctccatc
ggtgacgtcctctcccacctcacctcctctgtagagctggacttcggtactgcccacccc
ctcaaagtgaccatgctgcccaacccctcccacctggaggccatcaacccagtcacccag
gggaagaccagggcccggcagcagctcaaacaggagggagactactcaccagatgagaac
gcacaacctggggataaagtcgtatgtctccaggtccatggggatgcttcattctcgggt
caagggattgttccagagacattcaccatttcactactcccccacttcagagtcggtggg
agcatccacctcattgtaaacaaccaagtgggttataccactccatctgcgagagggaga
tcgtctttatactgcagtgatgttggtaagatggtgggctgtgcggtgatacatgtgaac
ggtgatgatacggaggaggtggtgcgtgcaacgcgtttggcggtagagtaccagagacgc
ttcaggaaggacgtcatcctggacctgctctgctacagacagtggggacacaatgagctg
gacgaacctggattcactaaccctgccatgtacaggattatccgctccaggaagagcatc
ccagactcctatgctgaccagctgatctcagagggcctgatgaccgaggaggaacgtggt
gccatcaggacagcccactacggcatgctgaacgacaagctggccaacatgaccctatac
agccctgcacccaccaacctgcaggggcgctggggaggtctggtggagccccaggccaga
gtcacccactgggacacgggggtgccagcccccctgctgcagtatgtaggggccaaatct
gtggagatacccgacgaggtccagctacacagccacctggggaagatgcatgtggcgggt
cgccgtgcgaaggtggagaatggaactaatctggactggtccactgctgaggccatggcg
tttggctctctgctctgccaaggcttcaacattcgtatcagtggacaggatgttgggagg
ggcaccttcagtcagagacatgccatgatagtttgtcaagacacagatgacatgtacatc
cccctcaatcacatagaccctgaacagaaaggattcatggaggtgtgcaacagcgccctg
tctgaggaggccgtgctgggctttgagtatggcatggccatcgcccagcctaaactactg
cctatctgggaggctcagtttggagacttcttcaacggagctcagatcatattcgacacc
ttcctctccggaggcgaggctaagtggctgctgcagtgcgggctggtgatcctgcttccc
catggttacgacggagcaggacctgaacactcctcctgccgcatggagaggttcctacag
ctgtgcgacagtaaggaggagggggtggatggtgacaatgtcaacatgggcgtggtcaac
cctacgaccccagcacagtacttccacctgctgagacgacagatgatacgcaacttccgc
aagccactgatcgtggctgggcccaaaactctgctccgattctctggggcaacatccagt
ctggctgacatggctcctggaacctctttcaaacctgtgattggtgacaccgcagtcaca
ccagccagtgtccagcaggtggtgctgtgttcagggaagcactactatgccctgttgaag
cagagggaggcatcagcagccactcagaacacagcactgatcagactggaggagctgtgt
cccttccctctggaggccctgcagcaggagctcaccaagtacaccaacgccaaagagttc
gtctggagccaggaggagccccagaacatgggcccctggtccttcgtggcccgtaggttt
gagaagcagctggcctgcaagctccggttggtgagtcggcctgctcttcccgccccggct
gtgggcatcggaacgctccaccaccagcagaacgaggccatcctcactgccaccttctcc
tcttga
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