Coregonus clupeaformis (lake whitefish): 121577120
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Entry
121577120 CDS
T08357
Name
(RefSeq) nuclear receptor subfamily 5 group A member 2-like
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121577120
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121577120
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
121577120
Nuclear receptors [BR:
cclu03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
121577120
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
AvrPtoB_bdg
Motif
Other DBs
NCBI-GeneID:
121577120
NCBI-ProteinID:
XP_041746846
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Position
11:18454095..18617888
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AA seq
549 aa
AA seq
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MSWSSPESESDQCGSTEDLTGAGGQPDGAESPAWSSGAVMLPKGDTESLGLVRSHGEQGP
RNMQAPHYKMMDYSYDEDLDEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCI
ENQTCAIDKTQRKRCPYCRFQKCLTVGMKLEAVRADRMRGGRNKFGPMYKRDRALKQQKK
ALIRANGLKIEAMTQVMQAVPTDLTISSAIQNIHQAASKGLPLSHHGHPHHAALSHTDYD
RSPFITSPISMAMPPHTGSLQGYQAAYGHFHSTRTIKSEYPDPYTSSPESIMGYNPYMDV
YQTGSPPSFPHLIVELLKCEPDEPQVQTKILTYLQQEQASRGKHDKLNTFGLMCKMADQT
LFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHIFRQVMHAKEGSILLVTGQQVD
YAVIASQAGATLNNLMSHAQEMVGKLRSLQLDQREFVCLKFLVLFSLDVKNLENFHLVES
VQEQVNAVLLDYVMCNYPQQTDKFGQLLVRLPEIRAISLQAEEYLYYKHLNGDVPCNNLL
IEMLHAKRA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtccagtcctgagagtgagagtgatcagtgcggctctacagaggacctgact
ggtgcgggtggtcagccggacggagctgagtctcctgcttggtccagcggagctgtcatg
ctgcccaaaggcgacacggaatctctgggactcgttcgatcgcatggagaacaggggcca
aggaatatgcaagccccccactataaaatgatggactactcctatgatgaagacttggat
gagatgtgtccagtttgtggagacaaggtttctggataccattatgggctcctcacctgt
gaaagctgcaagggcttcttcaagcgcacggttcagaacaacaagcggtacacatgcata
gagaaccagacctgtgccattgacaagacacaaagaaaacgctgcccttactgccgcttc
cagaagtgcctcactgtcggcatgaagctggaagctgtgagggcggaccgcatgcgcggc
ggccgcaacaagtttggccccatgtacaagcgcgaccgggcgctcaagcagcagaagaag
gcgctgatccgcgccaacggcctgaagatcgaggccatgacccaggtgatgcaggcggtg
cccaccgacctcaccatctcctcggccatccagaacatccaccaggccgcctccaagggc
ctgccgctcagccaccacggccacccgcaccatgccgccctgtcccacacagactacgac
cgcagccccttcatcacgtcgcccatcagcatggccatgcccccccacaccggttccctc
cagggctaccaggcggcctacggccacttccatagcacccgcaccatcaagtcagagtac
ccggacccgtacaccagctcgcccgagtccatcatgggttacaacccgtacatggatgtg
taccagacgggctcgccgcccagcttcccacacctcatagtggagctgctgaagtgtgag
cctgacgagccccaggtgcagaccaagatcctgacctacctgcagcaggagcaggccagc
cggggaaagcacgacaaactcaacacgttcggccttatgtgcaagatggccgaccagacg
ctgttctcgatcgtggagtgggcccggagcagcatcttcttccgcgagctcaaggtggat
gaccaaatgaagctcctccagaactgttggagcgagctcctcatcctcgaccacattttc
cgtcaggtgatgcacgccaaagagggctccatcctattggtcaccggccaacaggtggat
tatgctgtaattgcctcccaagccggagccactctgaacaacctgatgagccacgcacag
gagatggtgggtaagctgcgctccctgcagctggaccagagggagttcgtctgcctcaag
ttcctggtgctgttcagcttggacgtgaagaacctggagaacttccacctggtggagagc
gtccaggagcaggtgaacgcggtgctgctggactatgtcatgtgcaactacccccagcag
acagacaaatttggccagctgctcgtgcggctgcctgagatccgggccatcagcctccag
gccgaggagtacctgtactacaagcacctgaacggagacgtgccctgcaacaacctgctc
atcgagatgctacacgccaagagagcctga
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