Coregonus clupeaformis (lake whitefish): 121577152
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Entry
121577152 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase beta-like
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121577152
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121577152
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121577152
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121577152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fn3_Dep-1_4th
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
121577152
NCBI-ProteinID:
XP_045075672
LinkDB
All DBs
Position
Unknown
AA seq
2026 aa
AA seq
DB search
MKLHHTQSSKCLWANTSSAIPRHARLASISNCDSAPAWKCYDKLGTFGLAKKPMYLKKQG
IRVVIRGDQSYSNWTKYEEVDSGGRQVMTHLCARKGSTTISTTRMYSSTHKPVAYTSTVH
AIRTAPITAINTHSSSNTMRTHSRTPRQISILRVPITTPKSVVTYESMVATHTYDIVKTQ
TRWMATMGLIPSSISTAITSSGAALNDSHDFILSIPALSTTDSAMDKTVNAATENALLDS
RNDAKIPSVNQATSSSTPIIVDKLVSTDPTTTVVSSTISSVPNSSAKTDSKSTSASVDVT
ADAKVTTSVALSTPTPDSTTNSAATTIPIGTTALSTTRKLPPRKTVPSTPKTTTMQTTTT
AAPTTPIVAQTTMTTANPKMKVAPTTTATASLTITSTPPTISSTVKTTAKPKKKIAPPTT
STAPPTTSSTPPTTHPITSTTAQPTTTTTPPTTTTNLPTTTKILPTTTATTTTTTTPTTT
TTTPTTTTTTSTTTTTTSTTTTTIAPLTTTKTTPTTTTTTPTTTITTPTTTKTTPITSTP
TTTTSTTTTTTPTTTTTIAPLTTTKTTPTTTPTTTITTPITSTPTSTTPTPTTTTTTTTT
APPTTATAPTTTTTVPTTTTELTTTPQVETTEAVKCSFNLTEISANTDSIALKLITKGEA
CNFTVFYENGLSGITDCDQYGEDSNVYICDIRDLEPGTLHQFEVISKNDGERGNVSVQTD
PVGPSRLDVLPDQVQAAQYKSPIQGQGGSRGLHISWPRSHGQVNWYELTLQDTKTGTSRS
SRVMGTAATQSHFTALTPGTLYALSLVATAGNKTALPVLATASTAPSAVSGLQLSPSSSS
LGVSWQPGPGRREGFRLLLREQQGGLVRNVTLKSSVTSHTLDDLLPGTLYTVTVVTEAEG
LQNAISKQAVTAPVAVSDLLLENNGSLDTLRASWVKARGGVDAYLVSLATLGSANQDRKL
PPNATEVVFSGLTPGRLYQVTVSSKVGEQTTEAVATGRTVPDKVSQLSMVGVIDGSTMKI
TWSPPRGDRENYRVLLLNGTVALLNETVSRLVRQYSFSGAYLGLVPGRLHTAQVMVESGL
FGNTAQCQGRLAPRPVQQLVVRHSDETSLSVLWSRPEGVWDGYTVVLRQADTVVSQRTLS
RDARECTFNVLMPGRQYAIAVTTNSGGLNSSASVIGRTTPAQVTSLRVTNGGSTDSLQTQ
WERAAGELDSYRVLLIHDSSVIKNKSTSAHTTAYSFLALKPGALYRVVVITVRAGQASRQ
NVAEGHTVPAAVGVVTVSNNGRMDFLSVSWRPAQGDVDSYLVTLRDRERTVHTLVVSKSS
PECVFKSLVSGRLYNISIISRSGVYENHTIVQERTQPSSVQNYGKYETSMSTDGRTFPAA
VGSLALAGRGTEDLRVTWLAAPGDVDHYEVQLLFNDMKVFPPITLGSNVGKCVLSSLTPG
RLYKIHVSTFSGPNQRAQFIEGRTVPSKVKNIHVSNNGQSNSLKISWTPGQGDVDSYSVS
LSLDGPEGRMLETRPVPKHLNXLGFSSLQPGQLYSVTVRSISGILLNNNTASGRTVPSAV
TGLQADNRHTTCSIQVSWQEARGVADGYSLQLLDDRGHLVTNSSQASSGSTPLQHHFDGL
TPGKRYHILVHTTSGGVHSEGVTTEARTRPAAVSNLSIQANSSSSLSFHWSPPEGELEGY
DLYLYNGDDTLYDRRSSLPNTLQVSFQGLRPGASYRMVVLTRSGEQTNDTAIWARTVPAA
VTSLQARSHHQSEVLWVSWERAAGELSGYLLSVYNPDGSQQAEESLGPDATEHAVPTLIP
GRLYHAVILTRSGELTNRATTQGRTAPRPPTSVSFGGVTNTSLELTWSGPAGSDYDDFDL
QWAPRDHLSVFNPYHTRTSGSRILKGLYPGRLYNFSLRTVSGAVRGVGEDGSPAYSLPIH
KSIRTKPERVQYLHCRPQNSTSISCSWAPPEADYDSYTIECLHRDSRTLVYSRRTGRDST
LYHITQLEPHKRYTVSIKAISDSMTSEAAEDSVVTMIDREYQRGCV
NT seq
6081 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgcatcacacacaatcatccaagtgtctctgggccaacacgagcagtgcaata
cctcggcacgcgcgcctggcctcgatcagcaactgtgacagcgcacctgcctggaaatgt
tacgacaaactgggtactttcgggttagcgaagaagcccatgtacctgaagaaacaaggt
atacgcgttgtaattagaggagatcagagttattctaactggacaaagtacgaagaagtc
gactcaggagggagacaggtgatgacacatttatgcgcgcgtaaagggtccaccaccatc
tcaaccaccagaatgtattcatcaacacacaaacctgtggcatacaccagcactgtccac
gccatcagaacggcccctataacagccataaacactcactcttcatcaaacactatgaga
acccatagtaggaccccacggcagatctctattttaagagttcccatcacaacgcctaag
agtgtggtgacctatgagtctatggtggcaacgcacacttatgacatcgtcaagactcag
acgagatggatggctacgatgggtcttattcccagttccatctcaacggccatcacatca
tcaggggcagctctcaacgacagccatgattttatcttgtccattcctgctttgtccaca
actgactctgccatggacaaaacggtgaatgctgccaccgaaaatgccctcctcgactcg
aggaacgatgccaagattccatcagtaaaccaagcaacttccagttccacccccattatt
gtagataagctggtgtcaactgaccctaccactactgtggtttcctctacaatttcctca
gtgcccaactcaagtgctaagacagattcaaaatccacttctgcatccgtagacgttacc
gctgatgctaaagtcacaacttctgttgctttatctaccccaacccctgattccaccact
aattctgctgctaccaccatacctatcggtaccacagcattgtccacaactaggaaatta
ccccccagaaagactgttccatctacacccaaaaccacaacaatgcagactacaacaacc
gctgcccctactactcctattgtcgcccaaacaactatgactacagcaaatcccaaaatg
aaagtagccccaaccacaaccgccacagcctcactcacaataacttcaactcctcccaca
atatcttcaacagtaaagactacagctaaacccaaaaagaaaatagccccacccacaacc
tccacagccccacccactacctcttcaactccacccacaacccatccaatcacatctaca
acagcccaacccacgaccactaccacccctcccacaactacaacaaacctgcccacaact
accaagattttgcctacaactaccgcaaccacaactaccacaaccacacccacaactacc
acaaccacacccacaactaccacaaccacatccacaactactacaaccacatccacaacc
actacaaccatagctccactcacaactaccaaaaccacacccacaactaccacaaccaca
cccacaactactataaccacacccacaactaccaaaaccacacccataacttccacaccc
actactaccacatccacaactaccacaaccacacccacaaccactacaaccatagctcca
ctcacaactaccaaaaccacacccacaaccacacccacaactactataaccacacccata
acttccacacccacttctaccacacccacacccactactaccacaaccacaactaccaca
gccccacctacaacagctacagctccaacaacaactactacagtaccgactacaaccaca
gagttgaccaccaccccacaggtcgagaccactgaagcagtgaagtgttcatttaacctg
actgaaatcagcgccaatacggattctattgcactgaaattaataactaaaggagaagcg
tgtaacttcaccgtgttttatgagaatggtctgtccggtataacggattgtgatcaatat
ggggaggacagtaacgtgtatatctgcgatataagggatttggaacctgggacattacac
caattcgaagttatatcgaagaatgatggagagaggggcaacgtatcagtgcaaacagac
ccagtgggtccatccaggttggacgtactaccagaccaggtccaggcagcccagtataag
agtcctattcagggtcagggtggctcccgtggcctgcacatatcctggcctcgttctcat
gggcaggtcaactggtatgagctcacactacaggacaccaaaacagggacgagccgcagt
tcccgcgtcatgggtactgccgccactcagtctcacttcaccgccctcacccctggaacc
ctctatgccctcagcctggtggcaacggctgggaataaaacagccctgccagtgctggcc
actgcatccacagctccctcagccgtcagcggtcttcagctctctccctcctccagcagc
ctgggtgtttcctggcagcccggcccaggcaggagagagggattcaggttgctgctgagg
gagcagcagggcggcctagtcaggaacgtcacccttaagagtagtgtcacctcccacacc
cttgacgacctgttgcctgggaccctgtacactgtcaccgtggtgactgaggctgaaggt
ctccagaacgccatctccaaacaagcagtcacagctcctgtggcggtgtcagacctcctc
ttggagaacaacggcagtctggacaccctgagggcctcctgggtcaaagctaggggcggc
gtggatgcatacctggtctccctggcaaccctgggctcagccaatcaggacaggaagctt
cccccaaacgccacagaggtggtcttcagcggcctgacccctggacggctctatcaggtg
accgtgagttcaaaggtcggagagcagacaactgaggctgtggccacaggcagaacagtg
ccagacaaggtgtctcagctgtccatggtgggcgtcattgatggcagcactatgaagatt
acatggtcgccccctagaggggaccgggagaactaccgtgtcctgctactgaatggcaca
gtggctctactcaatgagacagtgagcaggctggttagacagtactccttctctggggct
tacttggggctggtgcctggcaggctccacacagctcaggtcatggtggagagcggtctg
tttggcaacaccgctcaatgtcaggggaggctagcccctcggcctgtccagcagctggtg
gtccgacacagtgatgagacgtctctgagcgtgctttggtctcgtccagagggggtgtgg
gacgggtacaccgtggtcttgagacaggcggacactgttgtgtcacagaggacactgtcc
cgtgacgccagggagtgcacattcaacgtcctcatgcccggacgccagtacgccattgcc
gtcacgaccaacagtgggggcctaaacagctcggcttcagtgattggacgaactaccccg
gcgcaggtgaccagtctgcgtgtgaccaacggtggtagcacagacagcctccaaacccag
tgggagcgggcggctggcgagctggactcgtaccgtgtgctgctcatccatgacagcagt
gtgatcaagaacaagagcacctcggcccacaccacagcctacagcttcctggcgctgaag
cctggagccctctacagggtggtggtcatcactgtcagggccggacaggcctccaggcag
aatgtggcagagggacacacagtccctgctgccgtaggtgtggtgacagtcagtaacaac
ggtcgtatggacttcctcagtgtgtcgtggcgaccagcccaaggcgacgtggatagttac
ctggtcaccctgagggaccgtgagaggaccgtccacaccctggttgtgtccaagtccagc
cctgagtgtgtgttcaagtcccttgtgtctggacggctctataacatctctatcatctcc
cgcagtggagtctatgagaatcacaccatcgtgcaggaacgcacacagccctctagtgtc
caaaactatgggaagtatgagaccagcatgtccacagacggaaggaccttccctgcggcg
gtgggatcactagccctggctgggcggggcacggaggaccttcgtgtcacctggttggct
gctccgggggacgtggatcactacgaggtgcagctcctcttcaacgacatgaaggtgttc
ccacccatcaccctgggcagcaacgtggggaagtgtgtcctttcctccctcaccccagga
cgcctctataagatccacgtttccaccttcagcggacccaaccagagggcccagttcata
gagggcaggacagttccgagcaaggtcaagaacatccacgtaagcaacaatgggcagagc
aacagcctgaagatcagctggaccccggggcagggtgacgtggacagctactctgtgtcc
ctgtcactggacgggccagagggacgcatgctggagacgcgacccgtacccaaacacctg
aattagctggggttcagctccctgcagcctggacagctgtacagtgtgactgtaaggtct
atcagtggtatactgttgaacaacaacacggccagcggacgcaccgtcccctctgcagtg
acgggcctgcaggctgacaacagacacaccacctgcagtattcaggtcagctggcaggag
gcccggggcgtggcggacggctacagcctgcagctgctggacgacaggggacacctggtc
accaacagctcccaggcctcctccgggtccacaccgctccagcaccatttcgacggcctc
accccggggaagaggtaccatatcctggtccacaccaccagcggaggggtccacagcgag
ggggtcaccactgaagcacgcacgcgtccggcggcggttagcaacctctccatccaggcc
aacagcagcagcagcctgtccttccactggtctcccccagagggagagttggaaggttac
gacctctacctgtacaacggagacgacaccctgtacgaccggcgcagcagcctgcccaac
acgctgcaggtctccttccagggcctgaggcctggtgcctcctacaggatggtggtgtta
acacgcagcggagagcagaccaacgacacagctatctgggccaggactgtcccggctgca
gtgacgtctctgcaggcccggagtcatcaccagtcggaggtgctgtgggtgtcgtgggag
cgtgcagcgggggagctgagcggctacttgctgtctgtctacaacccagatggctcccag
caggcagaggagtctctagggcccgacgccacggagcatgccgtccccactctgatcccc
gggcgcctataccatgctgtcatcctcacccgcagtggcgagctcacaaacagggccacc
actcagggcaggaccgcccccagaccccctacctctgtgtcattcggcggggtcaccaac
acttcactggaactgacctggagtggtcctgcaggcagcgactacgacgactttgacctg
cagtgggccccccgggaccacctgtctgtgttcaacccctaccacacccggacctccggc
agccgcatccttaagggcctgtaccccggacgcctgtacaacttcagcctgcgtactgtc
agtggggctgttcgtggtgttggtgaggatgggagccctgcctacagccttcccatccac
aagagcatccgaaccaagccagagcgtgttcagtacctacactgccgcccccagaactcc
acctctatctcctgctcctgggcccccccggaggctgactatgactcctacaccattgag
tgcctccaccgggactcccgcaccctggtgtactcccggcgtacgggccgcgacagcacc
ctctaccacatcacccagctggagccacacaaacgctacaccgtctccatcaaggccatc
tccgacagcatgactagcgaggccgctgaggatagcgtggtcaccatgatcgaccgtgag
taccaaaggggttgtgtttag
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integrated database retrieval system
