Coregonus clupeaformis (lake whitefish): 121577182
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Entry
121577182 CDS
T08357
Name
(RefSeq) caldesmon
KO
K12327
caldesmon
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
121577182
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121577182
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121577182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
121577182
NCBI-ProteinID:
XP_041746882
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Position
11:complement(50039695..50064883)
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AA seq
765 aa
AA seq
DB search
MDDDFDQRMELRRQRREQMRLEAEKGFSTTDDDEEVARERRRKAREERLKKAEMEESSSS
TMTTEVNNTHSVTETESSSTGAEVSSSSGGGDDVALLDRLAKREERRQKRLKEALDRQKE
FDPTITDGNENSQEETSSSRRHQGTEEEKEEKPVQEEVTTNSWSREEEKEVKEEEATPKE
EEPEPVTEPEKAEEVEEEKKEEEVEETQIVPDTFIEFVVPAAPLQECGFEISIMPKMVVE
EKAVEEISKKEEEEKQKKEMEEKEAAAKLKKEAEEKAEKERKEAEEKAAQLKKEEEEKAA
QLKKEEEEKAAKLKKEEEKAATLKKEAEEKEKAVELKKEAEEKAAKLKKEAEEKEKAAKL
KNEEEKSAKLKKEEEEKAAKLKKEEEEKSAKLKNEEEKAAKLKKEEEEKAAKLKNEEEKA
AKLKKEAEEKSKKSKQAEEKKKAEEEKSKKREAEKVEKPKLRSVKKDEESTPSKQQNGGV
ARSTEAEDQERLEAERKLEELKRRRDEADSEELEKMKQKQQESEAELEELKKKREGRKKI
IEEEEKQRKTELAEKKAKEQEERKRLKEEIEQRRKEAAEKKKQMIEESGDGDKKPFTLGV
TPKGKIGERAEFLNQRSQKGCKTSHAPIVSKIGNRLEQYTAAVQTNRDVRSPKSPVSDLP
ETPSIRNIKSMWEKGNVRGATESPKPTNKDAADIKVGVAGLTKGWGKSPADTGKAAAAAA
EKAEDLKPVDVGNKRSLWETKGSSPAKQVTVGGKSKSVTNAGVGR
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgactttgaccagcgcatggaattaaggaggcagaggcgtgagcagatgcgt
ctagaggcagagaagggcttcagcacaactgatgatgatgaggaggtggctcgcgagcgg
aggagaaaggctcgtgaggaacgattgaaaaaggcagagatggaggagtctagcagcagc
accatgacaacagaggtcaacaacactcacagtgtgacagagacagagtcctcctccacc
ggtgcagaggtgagctcctcatcaggtggtggggatgacgtggcactcctggaccgcctg
gccaagcgggaggaacgcagacagaagaggttgaaagaggcactggatagacagaaggag
ttcgaccctaccatcaccgacggcaatgagaacagccaggaggagacctcctctagcagg
cgccaccaaggcacagaggaggagaaggaggagaaaccagtccaggaggaagtaaccact
aactcctggagtagagaggaggagaaggaggtgaaagaagaggaggcgacgccaaaggag
gaagagcctgaacccgtcacagaacctgagaaagctgaggaggtggaggaagagaagaaa
gaggaagaggttgaagaaacgcaaatagtaccagacacatttattgaatttgttgtaccc
gctgcaccactacaagagtgcgggtttgaaatatccataatgcccaagatggtagtagag
gagaaagctgttgaagagatatctaagaaagaagaggaagaaaaacagaaaaaggagatg
gaagaaaaagaggctgcagcaaaactcaagaaagaggctgaggaaaaggctgaaaaagaa
aggaaagaagctgaagagaaagctgcacaactcaagaaagaagaagaagaaaaagctgca
caactcaagaaagaagaagaagaaaaagctgcaaaattgaagaaagaagaagaaaaggct
gcaacactcaagaaagaagctgaagaaaaagaaaaggctgtagaactgaagaaagaggct
gaagaaaaagctgcaaaactcaagaaagaggctgaagaaaaagaaaaagctgcaaaactc
aagaacgaagaagaaaaatctgcaaaactcaagaaagaagaagaagaaaaagctgcaaaa
ctcaaaaaagaagaagaagaaaaatctgcaaaactcaagaacgaagaagaaaaagctgca
aaactcaagaaagaagaagaagaaaaagctgcaaaactcaagaacgaagaagaaaaagct
gcaaaactcaagaaagaagctgaagaaaaatctaaaaaatctaagcaagcagaggaaaaa
aagaaagcggaggaggaaaagtcaaaaaagcgggaggctgagaaggtggagaaaccgaag
ttaagatcagtgaagaaagacgaggagtccaccccctccaagcagcagaacggaggtgtg
gcgcgctccaccgaggccgaggaccaggagcgcctggaggctgagcgtaagctggaggag
ctgaagcggcgtcgtgacgaggcggacagcgaggagttggagaagatgaagcagaaacag
caggagtctgaggccgagctggaggagctgaagaagaagagggaggggaggaagaagatc
attgaggaggaggagaagcagaggaagacagagctggcagagaagaaggccaaggagcag
gaggagaggaagaggttgaaggaagagatagagcaaagaagaaaagaggctgcagagaag
aagaaacagatgatagaggaatcgggcgacggagacaagaaacccttcacactgggtgtc
acgcccaagggcaagattggggagagggcagaattcttgaaccagagatcccagaaaggc
tgtaagacatcacatgctcctattgtctccaagataggcaacagactggaacaatacact
gctgcagttcagaccaaccgggatgtgaggtctcccaagtctccagtctcagacctgcca
gagacaccaagtatccgcaacatcaagagcatgtgggagaaagggaacgttaggggggcc
actgagagccccaagcctacgaataaggatgctgctgatattaaagtgggtgtggctgga
ctgactaaaggctggggcaagagcccagcagacactggcaaggcagctgcagccgcagct
gagaaggctgaagacctgaaacctgttgatgtgggcaacaagcgcagcctatgggaaaca
aagggctcctcccctgccaagcaggtgacagttggaggcaagagcaaatctgtcacaaat
gcaggtgtgggacgctaa
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