Coregonus clupeaformis (lake whitefish): 121577315
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Entry
121577315 CDS
T08357
Name
(RefSeq) sphingosine 1-phosphate receptor 4
KO
K04293
sphingosine 1-phosphate receptor 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04068
FoxO signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
121577315
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121577315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121577315
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Lipid
Sphingolipid
121577315
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
121577315
NCBI-ProteinID:
XP_041747013
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Position
11:complement(33953544..33956820)
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AA seq
399 aa
AA seq
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MDALSSLSSSTSCPYLYLWITNNSSRSSISSNVILEHYNHTGRLQHRGPRQGGLSLGASL
SLFISILIILENLLVLVAVLSRIRQSHRWVYVCIANITLSDLLAGAAYVVNICMSGSQTF
RLSPALWLFREGVMFVALAASIFSLLLIAVERYTTMMKPLHQKSAKKTCRIYGLVALCWI
LAFAIGFLPLLGWNCVCNLESCSTLLPLYSKQYILFSLFIFSLILLAIGVLYGAIYCHVR
SSAEVGSQRSRKRSLGLLKTVISIVGVFIMCWGPLFALLLLDFFCVSRQCAPLFSADWVI
ALAVLNSALNPVIYALGSTELRKAIAGLLCCCCLRAGLCHPDAFVSKETSSTGSTRHNSL
KNSFNKVRSLSISPPPAPKAPKKSRRLSSTTSCLSVSSG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctgtcctccctcagctcctcaacctcctgcccctacctgtacctctggatc
accaacaacagcagtagaagcagtattagcagcaatgtgatcctggagcactacaaccac
acagggcgtctgcagcaccgcgggccccgccaaggtggcctgagcttgggcgcgtccctc
tccctcttcatcagcatcctcatcatcctggagaacctgctggtcctggtggccgtgctc
tctaggatccgccagagccaccgttgggtctacgtgtgcattgccaacatcaccctgagc
gacctgctggccggggcggcctacgtggtcaacatctgcatgtctggcagccagacgttc
agactgagcccagctctgtggctgttcagggaaggggtgatgttcgtggccctggctgcc
tctatcttcagcctgctgctgatagctgtggagcgctacaccactatgatgaagccgctg
caccagaagtcagccaagaagacgtgtcgtatctatggcctggtggcgctgtgctggatc
ctggccttcgccatcggcttcctccccctgctgggctggaactgcgtgtgcaacctggag
agctgctccaccttgttgccactctactccaagcaatacatcctcttctccctgttcatc
ttctccctcatcctgctggccatcggcgtgctctatggcgccatctactgccacgtgcgc
agcagtgccgaggtgggatcccagcgcagccgcaagcgatccctggggctcctgaagacg
gtcatctccatcgtgggtgtgttcatcatgtgctggggccctctgttcgccctgctgctg
ctggactttttctgtgtgtcgcggcagtgcgcgccgctattcagtgccgactgggtcatc
gctctggccgtgctcaactctgctctgaacccggtcatctacgccctgggcagcacagag
ctgaggaaggccatcgcagggctgctgtgctgctgctgcctcagggcaggcctctgtcac
cctgatgccttcgtgtccaaggagaccagcagcacggggagcaccaggcacaacagcctg
aagaacagtttcaataaggtcaggagtctcagtatcagccccccgcctgcacccaaggcc
cccaagaagagccgccgcctcagctccaccaccagctgcctgtctgtgtcgagcggttag
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