Coregonus clupeaformis (lake whitefish): 121577319
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Entry
121577319 CDS
T08357
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121577319
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121577319
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7504
Det1
Methyltransf_34
Baculo_PEP_C
DUF6775
Ion_trans
Motif
Other DBs
NCBI-GeneID:
121577319
NCBI-ProteinID:
XP_045079551
LinkDB
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Position
11:complement(34687115..34692003)
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AA seq
681 aa
AA seq
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MNGNESSEVRQLFVLSQPQDQQLPPIEMQHQWMLRSGLPSCCANEDGVHCGSQQPSLHQH
QDPEWQHCCDHFSTLKCHQFSLYPSISSSPRVRNASGSHRWPENHNLVGKRQRQREQQVH
PHTKKVGHVGLTPSLSKSSSPLLPDTVVTSAKYSGDVGRLLSSLGASPPNLSELDSERQE
PLQTLQRSVLEEVFSKGFSENNSKANSEGARDAPQKRTKDIGYRLSQRRALFGKRKQLSD
YALIFGMLGIVIMVMETELSWGVYTKESSYSFSLKCLISLSTAILLGLIMMYHTREIQLF
MVDNAADDWRIAMTYERIFLVLLELLVCAIHPIPGQYVFTWTARLAFTYTPSVTDADVDI
VLSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLV
FSVSCWIIASWTVRVCERYHDTQEVTSNFLGAMWLISVTFLSIGYGDMVPHTYCGKGVCL
LTGIMGAGCTALVVAVVARKSELTRAEKHVHNFMIDSQLYKRVKNTAANVLRETWLIYKH
TKLVKKIDHARVRKHQRKFLQAIHQLRRVKMEQRKLIDQANTLVDLAKTQNMMYDLVSDL
QRLSKELDRRIGSLDDKLDSLLVSLQALPSLLSQAVTQQHRDFLDGLAPRVRTASKGSED
DWVPARRQRSLSTAPQTIPYS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcaatgagtcaagtgaagttaggcagctctttgttttgtctcaacctcaagac
cagcagctacctcccatagaaatgcaacaccaatggatgttaaggagtggtttacctagc
tgctgtgccaatgaagatggagtacattgtgggagccaacaaccttccttacaccagcat
caagaccctgaatggcagcattgttgtgatcattttagcaccctaaaatgccatcagttt
tctctctacccatccatcagcagcagcccacgagtgaggaacgcttccggtagccatcgg
tggccggagaaccataatctagtgggaaaaaggcaacgacaaagagagcagcaggtacat
cctcataccaaaaaggttggtcatgttggattgacgccttccctgtccaagagcagtagc
ccactccttcccgacacagttgtgaccagtgctaaatacagtggggatgttgggagactc
ctgagcagccttggagcttcgccaccaaacctttcagagctggactcagagagacaagag
cccctccagacactccaaaggtccgtcttggaggaggtgttctcgaaaggcttcagcgag
aacaacagtaaggccaacagtgaaggagcaagagacgcgccacagaagaggaccaaggat
attggctatagattgagccagcgtagggcgctctttggaaagcgcaaacagttgagcgac
tatgccttgatctttgggatgcttggaatcgtcatcatggtgatggagacggaactgtcc
tggggggtttacacgaaggaatcctcatactcattttctctgaaatgccttatcagcctt
tcaactgctatattactcggactaatcatgatgtaccatacacgggaaatacagctcttc
atggtggacaatgcagctgatgactggaggattgccatgacatatgagcggatcttcctg
gttctgctggagctgctggtctgtgccatccaccccattccgggccagtacgtcttcacc
tggacagcccggctggccttcacctacacgccctcagtaaccgatgccgacgtcgacatc
gtcctctccatccccatgttcctcaggctctacctgatcggtcgcgtcatgctgctgcac
agcaagctcttcacagacgcctcgtcgcgcagcatcggcgcactcaacaagatcaacttc
aatacgcgcttcgtcatgaagactctcatgaccatctgccccggcaccgtgctgctggtc
ttcagcgtctcctgttggatcatcgcatcgtggacagtgcgcgtctgtgagagatatcat
gacacacaggaagtgaccagtaacttccttggggccatgtggctcatctctgtcaccttt
ctctccattggttatggagacatggtccctcacacttactgtggaaagggtgtgtgtcta
ctgactggaatcatgggggccggctgcactgccctggtggttgcggtagttgccaggaag
tcagagttgaccagagctgagaagcacgttcacaacttcatgatagactctcagctctac
aaacgagtgaaaaacacagctgccaatgtactcagggagacatggctcatctacaaacac
accaaattagtcaagaagatcgatcacgccagggtacgcaaacatcaaaggaaattcctg
caagccattcaccaattgcgcagagtcaaaatggaacagaggaaactcatcgaccaggct
aatacacttgtggatctagccaagactcagaacatgatgtacgacctggtgtctgacctg
cagcggctcagcaaggagctggataggaggatcggtagtctggacgacaaactggactcc
ctcctagtcagtctgcaggccctacccagcctgctgtcccaggccgtcacacagcagcac
agggacttcctggatggcttggccccccgtgtacggacagcctcgaagggctccgaggac
gattgggttcccgccaggcgccaacggtccctctccactgcaccacagaccataccttac
agctga
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