Coregonus clupeaformis (lake whitefish): 121577368
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Entry
121577368 CDS
T08357
Name
(RefSeq) carbohydrate sulfotransferase 1-like
KO
K01022
keratan sulfate 6-sulfotransferase 1 [EC:
2.8.2.21
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00533
Glycosaminoglycan biosynthesis - keratan sulfate
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
121577368
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121577368
Enzymes [BR:
cclu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.21 keratan sulfotransferase
121577368
Glycosyltransferases [BR:
cclu01003
]
Unclassified
Sulfotransferases
121577368
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
121577368
NCBI-ProteinID:
XP_041747062
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All DBs
Position
11:48390542..48393933
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AA seq
430 aa
AA seq
DB search
MNSAMQCSWKAVILLALASIAIQYTAIRTFTAKPFQMCPVTVSNPLNCGMLGQDAVDSSF
DQRICDDFLYFTSNVSRKTHVLILATTRSGSSFVGQLFNQHQDVFYLFEPLYHVQTTLLP
RLSHSRTAGDTRVMLGASRDLLRSLYDCDLYFLESYIKPQPANHSTDKLFRRGASKALCS
LPVCDAFSPGESNIDEGECIRRCGGLNMTLASDACRERRHVAIKTVRIPEVSDLRALVED
PRLNLKVIQLVRDPRGILASRIETFRDTYRLWRIWRATGRRPYNLDLTQLTMVCEDFLGS
VTTGLSRPPWLKGRYMLVRYEDLARNPLQKTKEIYEYLGLIMDKNVGDWIQNNTRGSNDL
SAKHKYGTVRDSAANAESWRLKLSYEMVDYTQTVCQQVLQELGYKTVSSPEDLKNLSLTL
IEDKTFVPFL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagccatgcaatgttcctggaaggctgtgattctgctagccttagcgtccata
gcgatccagtacacagccatcaggacgttcacagccaagccattccagatgtgtccagtg
acagtctcaaaccctctgaactgtggcatgctggggcaggatgcggtggactcatccttt
gaccagcggatctgtgacgacttcctttacttcacctccaacgtctccaggaagacccac
gttctcatcctggccacgacccgcagcggcagctccttcgtgggtcagctgttcaaccag
caccaggatgtgttttatctgtttgagcccctctaccacgtccagaccaccttgcttccc
cgcctgtcccacagcaggacggcaggcgacactagggtgatgctgggggccagcagggac
ttgctccggagcctctacgactgtgacctttacttcctggagagctacatcaaaccccag
ccggccaatcacagcacagataagctgtttcggaggggagcaagtaaggctctgtgctcc
ctgcctgtctgcgacgccttcagtcctggagagtcgaacatcgatgaaggagagtgcatc
aggaggtgtggaggtctcaacatgacgctggcgtcggacgcctgccgtgagcggcgccat
gtggccatcaagacagtgaggataccggaggtgagcgacctcagggctctggtggaggac
cctaggctcaacctcaaggtgattcagctggtcagggacccccgagggatcctggcctcc
cgcatcgagaccttcagggacacctatagactctggaggatctggagggccactgggagg
aggccctacaacctggacctcacccagctcaccatggtctgtgaggacttcttgggctct
gtgaccactggcctcagcaggcccccctggctcaaagggcggtacatgttggtcaggtat
gaggacctggccaggaaccctctccagaagaccaaggagatctatgaatacctgggtctg
atcatggacaagaacgtaggcgactggatccagaacaacaccaggggaagcaacgatctg
tccgccaagcataaatacggcactgttcgggactcagctgccaatgcggaaagctggagg
ctcaaattgtcttatgaaatggttgattacacacagactgtgtgtcagcaagttctacag
gagctgggttataagactgtcagttcccctgaggacctgaaaaatctgtctctgactctc
atcgaggacaaaacttttgtaccttttttgtag
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