Coregonus clupeaformis (lake whitefish): 121577419
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Entry
121577419 CDS
T08357
Symbol
ptgfr
Name
(RefSeq) prostaglandin F2-alpha receptor
KO
K04262
prostaglandin F receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121577419 (ptgfr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121577419 (ptgfr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121577419 (ptgfr)
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Lipid
Prostaglandin
121577419 (ptgfr)
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Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
121577419
NCBI-ProteinID:
XP_041747106
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Position
11:24430182..24477849
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AA seq
436 aa
AA seq
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MPGNGSSEAGCSRAATRSYSNTTCSQTELSITASAISMTVGIISNILALCILVKAYRRFR
LKSKASFLLFASGLVGTDLLGHLINGSLVLYVYACNRKWETFDPHHILCGLFGVSMVFFG
LSPLLLGSLMAVERCIGITRPLFHSTVLAAHHMKRLLGMTWLLAALVALLPVLLWRPYQV
QRSQSWCFFRVEGPRDWLNVVLPLIFSTLGLLALLVSIVCNTLTSCTLLQSKLRCHRQRR
RKDTSHHFEMICQLLTIMLVSCVCWGPLLVNVIILSTQVQGERAFARLLLAVRMATWNQI
LDPWVYILLRKAVLKKLFLLVHSCWGTKSHSHPHTLNHWKCSPVKGSGETSGTSISTKPD
FFSLDRNVNVIILSTQVQGERAFARLLLAVRMATWNQILDPWVYILLRKAVLKKLFLLVH
SCWGTKSHSHPHTLNH
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcaatgggagttccgaggcgggatgcagcagggcagcgacacgcagctactcc
aacaccacctgcagccagacggagctgtccatcaccgcctctgccatttccatgaccgtg
ggcatcatctccaacatcctggctctctgcatcttggtcaaagcctaccgccgcttccgc
ctcaaatccaaggcctccttcctgctgttcgccagcggcctggtgggcaccgacctcctg
ggccacctcattaacggctccctggtgctgtacgtctacgcttgcaacaggaagtgggag
acctttgacccgcaccacatcctgtgcggtctctttggggtgtccatggtgttttttggt
ctgagccccctgctcctgggcagcctcatggcggtggaacgctgcattggtatcaccagg
cccctgttccactccacagtcctggccgcccaccacatgaagaggttgctggggatgacc
tggctgctagctgccctggtggccctgctacctgtgctgctgtggagaccctaccaggtg
cagcgctcccagagctggtgtttcttccgcgtggaggggccccgcgactggctgaacgtg
gtgctcccactgatcttctccacgctgggcctcctggcactgctggtgtccattgtgtgc
aacaccttgaccagctgcaccctactgcagtccaagctgcgctgccaccgccaacgtcgc
cgcaaggacacctcccaccactttgagatgatctgccagctcttgaccatcatgcttgtg
tcctgtgtgtgctggggccctttattggttaacgtcatcatactgagcacccaggtccag
ggcgagcgtgcgtttgcccgcctgctgctggcagtccgcatggccacctggaaccagatc
ctggacccctgggtctacatcctcctgaggaaggccgtcctcaagaagctcttcctgctg
gtgcacagctgctggggcaccaagtcccactcccacccccacacccttaaccactggaag
tgcagcccagtgaagggctctggggagaccagcggcacctccatcagcactaagccagac
ttcttctctttggatagaaatgttaacgtcatcatactgagcacccaggtccagggcgag
cgtgcgtttgcccgcctgctgctggcagtccgcatggccacctggaaccagatcctggac
ccctgggtctacatcctcctgaggaaggccgtcctcaagaagctcttcctgctggtgcac
agctgctggggcaccaagtcccactcccacccccacacccttaaccactag
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