Coregonus clupeaformis (lake whitefish): 121577425 Help Entry 121577425         CDS       T08357                                  Name (RefSeq) roquin-1-like   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cclu03000]     121577425    04121 Ubiquitin system [BR:cclu04121]     121577425 Transcription factors [BR:cclu03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     121577425 Ubiquitin system [BR:cclu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     121577425 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK zf_CCCH_4 Prok-RING_4 zf-RING_6 FYVE Baculo_IE-1 Motif Other DBs NCBI-GeneID:  121577425 NCBI-ProteinID:  XP_041747110 LinkDB All DBs Position 11:26750040..26783061 Genome browser AA seq 1045 aa AA seqDB search MPVQAPQWTEFLLCPICTQMFEESVRKPISLGCGHTVCKMCLNKLHRKACPFDQTAIATD IELLPVNTALLQLVGGQVPKREPTTLVTGAEDIAHYEEASECVEELAQYLKPLSNSRGVG LSTSSAQSSLSRPMQRKLVTLVHCQLVEEEGRVRATRAARSLGERTVTELILQHQNPQQL SSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASK TSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEDFWTYEALRREHDSQIVQIAMEGGLRIA PDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLEL LANIDPSPDSPPPTWELLDTGLVAVKTVVHGLVDFIQNHSKKGSDPQQPPQHSKYKTYMC RDMKQKGGCPRGASCTFAHSQDELEKYRKMNKRLAARRPLSLSLTQLNEVGLLPEEVGML EGLAHKGLTNGMVTSVTGSALPQLISRGADPSYEPMMRKPQSQGSLSAPSSPPDLLDPVP NRAMAHPRMAADHLAMHKQMPRRPPMYPPQQGELFYPPEPRTPPSALQYESSQYPPGNPP TPTSPPSTLPSLPPYPGTYPQERQCPPPPQPSSSHFSNVNPHGYPPPPHYDGRRHPAYPP PPPQSYPHREDPSSMPADEASRERYPPEGYHPPGPHPSHMRPYTPREAYSRPQPTPSLDY LHRRRQEIMAQLEDRKQVTPPPFAPSPTLPHHYESNYTQEQQQYMENSQAFSKYREPDYA SQYSPWSCDTIGSYIGSKEGKSKNNIEMMNTEGKGVEGRRRAAEARDDDPIIPFGSLPTV SRFGVISRTPKTGYLTAGPGQAMTPSQGTNSPKHGTATADYHYGKGAGWGAAPYSQPPQA HLSERPVKEREQLTMELQQVNQQINKQTAQADQPSPEEWSSGSVSSQQLSLELHRVEREI GKRTRQIALEHLVCHDGSGAYKLKPTENGQRAEHSLVLSEGCNGSSGVLQGGSVASGGLS LSLSTDLPTTGGTDRKTNGVVHLCS NT seq 3138 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaagcgccacaatggacggaattcctgctgtgtcccatctgcacccagatg ttcgaggagagcgtccgcaagcccatcagcctgggctgcggccacaccgtctgcaagatg tgcctgaacaagctgcaccgcaaggcctgccccttcgaccagacggccatcgccaccgac attgagctgctgcccgtcaacacagccctgctgcagctggtgggaggacaggtgcccaaa cgggagcctaccaccttggtgacgggggcagaggacatagcccactatgaggaagccagt gagtgtgtggaggagctggctcagtacctgaaacccctgagcaacagcagaggtgtgggg ttgagcaccagcagtgcccagagttctctgagtcggcccatgcagaggaagctggtgacc ctggtgcactgtcagctggtggaggaggagggccgggtgagggctacgcgggcggccagg tctttgggggagcgcaccgtcactgagctcattctgcagcaccagaacccgcagcagctc tcctcaaacctgtgggctgcagtcagggcaaggggctgccagtttctcggcccagcgatg caggaggaggctctgaaactggtgctcttggctctggaggacggctccgctctgtccagg aaggtcctggtgctgtttgtggtccagaggttagagccacgcttcccccaggcctccaag actagcataggccacgtggtgcagctcctttacagggcttcctgcttcaaggtgaccaag cgtgacgaggactcgtccctgatgcagttgaaggaggacttctggacgtacgaggcgctg aggcgcgaacacgactcccagatcgtccagatcgcaatggaggggggcctccgcatcgca cctgaccagtggtcttccctgctctacggggaccagtcgcacaagtcccacatgcagtcc atcattgacaagttgcagacgccagcgtcgtttgctcagagcgttcaggagttgaccatc gccctgcagaggacgggcgacccggccaacctgaaccgcctgcgaccacacctggagctg ctagccaacatcgaccccagcccagactcccctccccccacgtgggagctgctggacacg ggcttggtggcagtgaagaccgtggtacacggcctggtggacttcatccagaaccacagc aagaaggggagcgatccgcaacagccgccccagcacagtaaatacaagacatacatgtgt cgggacatgaagcagaaggggggctgtcctcgaggagccagctgcaccttcgctcactct caggacgagctagagaagtaccgtaagatgaacaagcggctggctgcccgccggcccctc agcctatccctgacgcagctgaacgaggtcggcctattgcctgaggaggtggggatgctg gaggggctggcccacaagggcctgacgaatggcatggtgacgtcggtcacaggctccgcc ctgccccagctcatctcccgcggtgccgacccctcctatgagcccatgatgcggaagccc cagtcccagggaagcctcagtgcccccagctctcctccagacttactggaccctgtgccc aatcgggccatggcccaccccaggatggcagcggaccacttggccatgcacaagcagatg cccaggaggccccccatgtacccccctcagcagggagaactcttctacccccctgagccc aggacacctccatcagccctgcagtatgagtcctcccagtaccccccaggtaacccccct acccctaccagccctcccagtaccctccccagcctccccccctaccccggcacctacccc caggagcgccagtgtcctcctcccccccagccctcgagttcccacttctccaacgtcaac ccccatgggtatccgcctcccccgcattacgacggccgtcgacaccccgcctaccccccg ccaccaccacagtcctatccccaccgggaggacccctcctccatgcctgcggatgaggcc tccagagaaagataccctcctgaggggtaccacccccctggcccccaccccagccacatg aggccctacacccccagggaggcttacagccggccccagcccactcccagtctggactac ttgcaccgccggcgccaggagatcatggcccagctggaggacaggaagcaggtcactcca ccacccttcgccccctcgcccacgctgccacaccactacgagtccaactacacacaggag caacagcagtacatggagaactcacaagcgttctcaaagtatcgtgagccagactacgct agccagtactctccttggtcatgtgacactatcggctcctacattggcagcaaggagggg aagtccaaaaacaacatagagatgatgaacactgaggggaaaggtgtggaaggcaggcgc agggctgctgaggccagagacgacgaccctatcatccccttcggctccctgcccaccgtg tcacgcttcggggtgatctcccgcacccccaagactggctacttgactgccgggccgggg caggccatgaccccctcacagggaaccaatagccccaaacacggcactgcaacagcggac taccactatgggaagggtgcagggtggggtgctgccccttacagccagccccctcaggcc cacctcagtgaacggccagtcaaggagagggagcagctgacgatggagctccagcaggtc aatcagcagatcaacaagcagactgcccaggcggaccagcccagcccggaggagtggtcg tcggggagtgtctccagccaacagctgagcctggagctccaccgtgtggagagggagatc ggcaagaggacccgccagatagccctggagcaccttgtgtgtcatgatgggagtggggcg tacaagctgaagcccactgagaacgggcagagagcggagcactcgttggtcctcagtgag ggctgtaacggttccagtggtgtgctgcagggcggcagtgtggccagcggcggtttgtcc ctcagcctgtccacagacctccccaccaccgggggcactgaccgaaagacgaacggcgtg gtccacctctgctcctag

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