Coregonus clupeaformis (lake whitefish): 121577550
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Entry
121577550 CDS
T08357
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121577550
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121577550
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121577550
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
121577550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
121577550
NCBI-ProteinID:
XP_041747187
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MATNRERQVSHMTGFSPAVYPFAFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLLESYELSG
ELEELVNKVSKAHKDTFPSLVQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTELVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKVTDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
SSDSGDSASAPPAIQAIKKEREEEKSLEEEDEDEEDEWGDEERERGADSDGEPWGEAAAA
EAGSQKGATGRSQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaacagggaacggcaggtgagtcacatgactggcttctcacctgccgtctac
cccttcgccttcaactccatgaggagccactcacccttcgacctgctggccaatagcagc
ctctttggacgttttggggcggaccttccgaaagaaatggctgcattgtcagtggagacc
cagagcaccagctctgaggagatggtgcccagttcaccctctccgccccctcctccccgc
atctacaagccctgtttcgtgtgccaggacaagtcctctggctaccactacggggtcagc
tcctgtgagggttgcaagggattcttccggcgcagtattcaaaagaacatggtgtatacc
tgccaccgagacaagaactgtcagatcaacaaggtgacccgtaaccgctgtcagtactgc
cggctgcagaagtgctttgaggtcggcatgtccaaagaagcggtgcgtaacgacaggaac
aagaagaagaaagatgtgaaggaggaggtggtgttgctggagagctacgagctcagtgga
gaactggaggagctagtcaacaaagtcagcaaggcccacaaagacacctttccctcactc
gtccagctgggcaaatacacgacaaactccagttcagaccaccgtgtacagttggacctg
gggctgtgggataagttcagtgaactctccaccaagtgcatcatcaagatagtggagttt
gccaagcgcctgccaggcttcaccaccctcacaattgctgaccagatcactctcctcaaa
tcagcctgtctggacatactgatgctgaggatctgcactcgctacactccggagcaggac
acaatgaccttctccgacgggctgaccctgaaccggacccagatgcacaacgcaggcttc
ggccctctcacagaactggtgtttgccttcgctggccagctgctgcctctggagatggac
gacacagagaccggcctgctcagcgccatctgcctgatctgcggagaccgtatggacctg
gaggagccccagaaggtggacaagctacaggagcccctcctggaggccctgaagatctac
gcccgccgcagacgccccaacaagccccacatgttcccccgcatgctgatgaaggtcact
gacctcaggggcatcagcaccaagggtgctgagagagccatcactctgaagatggagatc
ccaggccccatgcctcctctgatcagggagatgttggagaaccctgaggcctttgaggac
agcagcgactctggggacagcgcctccgccccccctgccatccaggccatcaagaaagag
agggaggaggaaaagagcctggaggaggaagatgaggatgaggaggacgagtggggggac
gaggaaagggagagaggggcggacagcgatggggagccctggggggaggctgcagcggca
gaagcagggtcccagaaaggggcgactgggagatcccagtaa
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