Coregonus clupeaformis (lake whitefish): 121577584
Help
Entry
121577584 CDS
T08357
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121577584
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121577584
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121577584
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121577584
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121577584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Motif
Other DBs
NCBI-GeneID:
121577584
NCBI-ProteinID:
XP_041747245
LinkDB
All DBs
Position
12:complement(36967480..37005988)
Genome browser
AA seq
1009 aa
AA seq
DB search
MMAEGGGPESGSSADSDPESVAAQIPTPSTDSQKQCIGTLLKTTLRKSDEWFLIDSRWFK
QWKKYVGFDSWDMYNVGEHSLYPGPVDNSGLFSYHDTQILKEHLIDELDYVLVPTEAWNK
FVSWYGCLEGQRPIARKVVEHGMFVKHCKVEVYLLELNLCENDNMDNVVTRHFSKADTID
TIEREMRSLFEIPTGKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIECKNEDGT
WPRQASHPKSSTATSRNFTTSPKLSSNSSATISSTVTNGDSSNSGYTLNNSTSSGNRLGG
YNSYSSSYNYRESPSQPGLCGLSNLGNTCFMNSALQCLSNACPLTEYFLDDQYEAEINRE
NPLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLM
DGLHEDLNRVKKKPYLALQDAGGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVCP
ECAKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRIDPDSRPTQYRVVVPKLGSVTDLCSAL
SRLSGIPAENMVVADVYNHRFHKIYRRDDGLNHIMEKDDIFVYEVAEEDRERMNLPVYFR
ERHSKHTGGSTGTMLFGQPLLITVPRQNLAADMLYEKVLERIGRYVKRFQSSNVEGRASA
SASSASCSLVAECSATSSNHNAAASGSGSPLLEGASCSSSNGSNHSGSSNRSNGNGRCEG
EEEAMDHQVSPEPENGQSGEEEEASDLENGPKTKECSSTPPKLFSFSMVNSYGTANISPL
PCDGNVLKLNTHSTVAIDWDSDTKKLCYDDQEAEAYEKHESMLQAQKKKATVALRECIEL
FTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDF
PVRDLNMSGFVCDPKAGPYVYDLIAVSNHYGGMGGGHYTAYGKNKADGKWHYFDDSSVSA
ASEDQIVTKAAYVLFYQRRDAGDAPAKLPPSASLGGATTEAADDHMDTN
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggagggaggcggacccgagtcgggtagctcggcagactccgatcctgagtct
gtagccgctcaaataccgacaccttcaaccgacagtcaaaaacagtgtatcggaacactt
ctcaaaacaactctacgaaagagcgacgagtggtttctgattgatagccggtggttcaag
cagtggaaaaaatatgtgggatttgacagctgggatatgtacaatgttggagagcacagt
ctctatcccggccctgttgacaactctggcctgttctcataccatgatacccagatcctg
aaggagcaccttatagatgagctggactatgtccttgtgcccactgaggcgtggaacaaa
tttgtcagctggtatggttgccttgagggccagcggcccatcgccagaaaggtggttgaa
cacggcatgtttgtcaagcactgtaaagttgaggtctatctgttggagctcaacttgtgt
gagaatgacaacatggacaatgtggtcacacgtcatttcagtaaagctgacactatagac
accatagagagggagatgcggtcactatttgagatcccaacggggaaggagactcgactg
tggaacaagtacatgagcaacacgtacgagcagctgaacaagccagacagcaccgtacag
gatgctggtctcttccagggccaggtgctcgtgattgaatgcaagaacgaggacggcacg
tggcccagacaagcctcccatccaaaatccagtacggctacatccaggaatttcactacc
tctccaaagctctcttctaactcgtcggcaactatctcctcaacagtaaccaatggggac
agcagcaactctggctatacactgaacaacagcacctcctctggcaatagattgggaggt
tacaattcatacagctcctcctacaattacagagagtcaccatcccaacctggcctctgt
ggtctcagtaacctaggcaacacctgcttcatgaactccgccctccagtgcctgagcaat
gcgtgccctctcactgaatacttcctggatgaccagtatgaggcggagatcaaccgggag
aatccattaggaatgaggggggagatcgcagaggcctacgcagacctggtcaagcagatg
tggcttagccgcagcagctatgtggctccccgcacctttaaaacccaagtgggccgcttc
gccccccagttttcagggtaccagcagcaggactcccaggagttgctggccttcctgatg
gacgggctccacgaagacctgaaccgcgttaaaaagaagccttacctggccctgcaggac
gcaggggggcggccagacgagattgtagctaaggaagcatggactaaccatcgcctgcgc
aatgactcaatcattgtggacatattccatggcctgttcaaatccactctggtgtgtcca
gagtgtgccaaggtctctgtgacctttgacccattctgctacctcacactccctctgccc
atgaagaaggaccgaactatggaggtgttcttggtccgcatcgaccccgattccagaccc
acgcagtaccgagtggtggtccccaagcttggctcagtgacagacctgtgcagcgccttg
tccaggctctctggaatccctgctgagaatatggtggtggctgatgtttacaatcaccgg
ttccacaagatctacagacgagacgacggcctcaaccacatcatggagaaagatgacata
tttgtgtatgaggtggcggaggaggacagggagaggatgaacctgcctgtgtacttcagg
gagcgccactccaagcacacgggcggctccacgggcaccatgctgtttggccagcccctc
ctcattactgttccccggcagaacctggccgctgacatgctctacgagaaggtgctggag
aggattgggcgctacgtgaagcgctttcagagctccaacgttgaggggagggcctccgcc
tctgcctcctcggccagctgcagcctggtagccgagtgctcagcaacatcctccaatcac
aacgctgcagcgagtgggagtggtagccccctgttagaaggggcgtcctgcagctccagc
aacggcagcaaccactcggggtcctccaacaggtccaacgggaatgggaggtgtgagggt
gaggaggaggccatggatcaccaggtgagcccggagccagagaacggccagtcgggggag
gaggaggaagcctcggacctggagaatggccctaaaaccaaagagtgctccagcaccccg
cccaaactcttctccttcagcatggtcaactcctacggaacggccaacatcagtccactg
ccttgtgacggaaacgtcctcaaactcaatacacattccacagtggcgattgactgggac
tcggacacaaagaaactgtgttacgacgatcaggaagcagaggcctatgagaagcacgag
agcatgctccaggcccagaagaagaaagccacagtggctctgagggaatgcatcgagctc
ttcaccacaatggagacgctaggagagcatgacccatggtattgccccacctgtaagaag
caccaacaagccacgaagaagtttgacttgtggtcgttgcctcgcatcctggtggtccac
ctgaagcgcttctcctacaaccgctgctggagggacaagctggacacggttgtggacttc
cctgtcagggacctgaacatgtctgggtttgtgtgtgaccccaaggccggcccctatgtt
tatgacctcatagcagtctccaaccactatggaggaatgggaggaggccactacacagcc
tacggcaagaacaaagctgatgggaagtggcattactttgatgacagcagtgtctcggct
gcctcagaggatcagattgtgacaaaagcagcctacgtgctattttaccaacgcagagat
gcgggcgacgcccctgccaagcttcctccctctgcctctctggggggtgccaccactgaa
gcagccgatgatcacatggataccaactga
DBGET
integrated database retrieval system
