Coregonus clupeaformis (lake whitefish): 121577602
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Entry
121577602 CDS
T08357
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121577602
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
121577602
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
PH_9
IQ_SEC7_PH
FYVE_2
PH_11
Motif
Other DBs
NCBI-GeneID:
121577602
NCBI-ProteinID:
XP_041747268
LinkDB
All DBs
Position
12:complement(38412506..38453734)
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AA seq
1549 aa
AA seq
DB search
MNTDFKKPPIAPKPKLVSHLTFKLPSPLMSRPCSSARGPKPPIAPKPKVPHDLEGRDSSL
LSNNSQEGYTNGDMLPSDEELDQENEPEDTLSGGEGLEEEEPVEPQYYSDALSSGVNENG
YEEQREQEEKMMQEEEEDCRLTDSVQTEEVDSLEMLGVSNAGFTIDSVDTVEKIDTDITD
DIDAEGSYAGEALADKDGLSVCDLSITSIEEEEAACYPCETGPGQEERDVEEEREQEEEC
RREEEEEAANSTADAVTVSISEEPIALLVKDNIEDLVTKEPSSFKEEDEEEAEESLPNPG
SPHNVLQDDGYDVIGPSNERVGRCQPYSIIDEDPMTIQYSIEEGECQQSHHEAKQLFDTE
EEAADPSLEPYYISTEDIVNLEQSPTEGKGHGSAESESTSEESSLATTEITEPSEYAAIG
DDDSLCDDSDDMGKIECVSSEDYVEIDDDDDDDDDRENMTGSCQKRTPGFQTVEAFLNQS
NNQPRFRLVSISLPADTDTSQALLFSDSQLLSPDDSDVFRDEEDLEGHIVPYLDETTDTE
DNLSDEHVYEEAGLDSEGENFLPFDRKSIVTRSRSLSGKVPGYVPETVPEEAGSEFHVQK
YCKVGLDRRGPALSSSPMLNSTRAKSSSKPHRFLLYPRSFSMEARDLPLSVYREGQGFLE
ETGEDSLSLPCVTGSSGSFSQRSPLPSSGLSTPTSMVDIPPPFELAYITKKPITKSSPSL
FIEGESPDRQKKKKSSFKRFLMLKLRRKTESKLVVDVNVSSSRSSSESSHHGIAKVLDLD
RRSTGSSPQVKSWKVSKPQRSPESPSTFLFYKDGKRKGGSVAFLNRSVARVESFEDRTLA
PFTPLPLTKPRSISFPNADTSDYENIPAQTLNSDYENIQIPSRRPVRPGTFAEFFDHQSR
VLSSANETDGYVDMSSFPRFERKAQSPEQEPESAYTEAYTMCSIAVGPPGGTGGEAGGGT
TGEEDQGCTSEEEEEGGADNTYDRQSDGRSRAFYIAKELVDTERLHVKALKLLQEDFREA
VGAAVGDEGDPVLEEERLREILNELPDVYTLHRRILTELENRIRQWEESQRIADVILSRK
FEFVVFTTYIGHYDRSMSLLDESCRTSPAFSAIVSQYEQSPAGDNVSLKHQLLQVIVRVA
QYRLLLTDYLNNLSPDSKEYEDTLAALVVVSDIADQANDSLKHGENLLHLVNIEYSVGGQ
RDLLQPGRVFVKEGTLMKVSRKCRQPRHLFLMNDVLLYTYPQQDGKYRLKNSLPLTGMKV
SKPVIENVQNALRIEGADISITLAASSCSEREDWFHTLSRTVSDHARGPATFSSCSGEAR
ERLWLSLGEKAPTLVPVSHVMMCMNCTSDFSLTLRRHHCHACGRIVCRSCSRNRYPLKYL
KDHMAKVCDHCYSELKKRGGNVSGASGTDSPRSNRRSIRPLSAVFQNIHPPSLWRRKGTA
SLTQVGVSEEGSMSGTLQRSKRSKRNWKRLWFLLKDKVLYTYQAREEKVASESLPLLGFT
VKLPDRPDGEETTNVFELYHKKTLYYTFKAEDNHTAKRWVNAMEEATVL
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagattttaagaaacctcctattgctcctaaaccaaagcttgtgagtcacctc
accttcaagctgccttccccactcatgtcccggccctgctcctcagccaggggccccaaa
cctcccatcgcccccaaacccaaagtaccacatgaccttgaggggcgtgactcttccctg
ctctccaacaacagccaggaggggtacaccaacggggacatgctgccctcagatgaggag
ctggaccaggagaacgagccggaggacactctgagtggaggggaggggctagaggaggag
gaaccagtggaacctcagtattactcagacgctctcagttcaggggtcaacgagaatggg
tatgaagagcaaagggaacaggaggagaagatgatgcaggaggaagaggaggactgtagg
ttaactgacagcgttcaaacagaggaggtggattctctggaaatgctgggggtcagtaat
gctggattcacaattgactcagtggacacggtggagaagattgatacggacatcactgat
gacatcgacgctgagggcagctatgcaggcgaggcgctggccgacaaagatggcctctca
gtgtgtgacctctccataaccagcattgaggaggaggaggcagcatgctacccctgtgaa
actgggcctgggcaagaggagagggatgtagaggaggagagggagcaggaagaggagtgc
cgaagagaggaagaagaagaagcagctaatagcacagcagatgcagtaacagtatctatt
tctgaggaacccatagctctccttgtcaaagacaacatagaggaccttgttacaaaagag
ccttcatccttcaaggaggaggatgaggaggaagcagaagaatccttacctaaccctggt
agtcctcacaatgtcctacaggacgatggatatgatgtaattggtccctcaaatgagaga
gtaggaaggtgccaaccatattccatcattgatgaagaccccatgactattcagtacagt
attgaagaaggtgagtgccaacaaagccaccatgaagcaaaacaactctttgacacagag
gaggaagcagctgaccccagcctggagccttattacatctcaactgaggacattgtgaac
ctagagcagagccccacagagggtaaaggtcacggatcggcagagagtgagagcacttcg
gaggaatcttcactggccaccacagagatcacggaacccagtgagtacgcagccataggt
gatgatgactcgctgtgtgatgactctgacgacatggggaagattgagtgtgtctcctct
gaggactacgttgagatagacgacgatgacgatgatgatgatgacagggagaacatgaca
ggttcatgtcagaaaaggacgcctggattccagacagtggaggctttcctgaaccagagt
aacaaccagccccgtttcaggctggtgtccatctctttgccagcggacacagacacctcc
caggccttgttgttctctgacagccagctgctctccccagatgactctgatgtgttcagg
gacgaggaggacctagagggccacatcgttccctacctggatgagaccacagacacagaa
gacaacctcagtgatgagcatgtctacgaagaggccggcctggactcagagggggagaat
ttcctgccttttgacaggaagtccattgtcaccaggtcccggtcgctgtcggggaaagtg
cctggttacgtgcctgagacggttccagaggaggcgggttcagagttccacgttcagaaa
tactgcaaggtgggattggaccggaggggacccgcgttgagcagcagccccatgttaaac
tcaacccgggccaagagctcatccaaaccacatcgctttcttctgtacccccgctccttc
tccatggaggcacgggacctgcccctaagtgtgtacagggagggccagggtttcttggag
gagacgggggaggacagcctctccctgccgtgtgtcacgggctcttctggaagcttctcc
cagcgaagccccctgccctccagcggcctgtccactcctacatcaatggtggacatccct
cctccctttgagctggcctacatcaccaagaagcccatcaccaagagctccccgtccctg
ttcatcgagggagaatccccagacaggcagaagaagaagaagtcctccttcaagcgtttc
ctgatgctgaagttaaggagaaagacggagagcaagctggtggtggatgtcaacgtgtcc
tcctcgaggtcctcctctgagtccagccaccacggcattgccaaggtccttgatttagac
aggcgcagcacaggcagctccccgcaggtcaagtcctggaaagtcagtaagccccagcgc
tctcctgagtccccatccacctttctgttctataaggacgggaaaagaaaagggggttct
gtggccttcctcaaccgcagcgtggcccgggtagagtccttcgaggatcgcactctcgcc
cccttcaccccccttcccctgactaaaccccgctccatctccttccccaacgctgacaca
tcagactacgagaacatcccagcccagaccctcaactccgactatgagaacatccagatc
ccctctcggaggcctgtacgaccggggacctttgcagagttctttgatcatcagagtcgg
gtgctgtcttctgccaatgagactgatggttacgtggatatgagtagcttccctaggttt
gagagaaaagctcagtcgcctgagcaggagcctgaaagtgcctatacagaagcctacacc
atgtgctccatagctgttggtccccctggtgggacagggggtgaggcggggggagggaca
actggggaggaggaccaaggatgcacctctgaggaggaggaggagggaggagcagataac
acatatgacagacagagcgatggtcgatccagagccttctacattgccaaagagctggtg
gacactgagagactacatgtgaaagccctcaagcttctccaggaggacttcagggaggcg
gtgggggctgcagtaggggatgagggggatcctgtgctggaggaggagaggctgagggag
atcctcaacgagctgcctgatgtttacactctgcaccgcagaatcctcaccgagttagag
aaccgcatccgacagtgggaggagagccagaggattgcggatgtcatcctatccaggaag
tttgagtttgtggtcttcacgacctacatcggtcactacgaccgcagcatgagcctgctg
gacgagagctgccggacctcacccgccttctcagccatcgtcagccagtatgagcagagt
ccagcaggggacaatgtctctctcaaacaccagcttctgcaggtcatcgtacgggtggct
caataccgcttgctcctcactgattacctcaacaacctctccccagactccaaagaatat
gaagacacactggctgctctggtggtagtgtcagacattgcagatcaagccaatgacagt
ttgaaacatggggagaacctgctacatcttgtcaacatagagtacagtgttggaggccag
agggatctgctccagcctggcagggtgtttgtgaaggagggtactctgatgaaggtcagc
aggaagtgcagacagccacgccacttgtttctgatgaatgatgtgctgctgtacacctac
cctcagcaggatgggaaatacagactgaagaacagcctcccactcactgggatgaaggtc
agtaaacccgtcatagagaatgtgcagaatgctctgaggatcgagggagcagacatctcc
atcaccttggcagccagctcctgtagtgagagggaggactggttccacactctgagtcgg
acagtgtctgaccacgccagaggacctgcgacattcagcagctgctctggagaggccaga
gaacgtctgtggctgtccctgggggagaaggctcctactctggtgcctgtgtcccatgtg
atgatgtgtatgaactgcacctcagacttcagcctcacactgcgcagacatcactgccac
gcctgcgggaggattgtgtgtcggagctgctccaggaacagataccctctgaagtacctg
aaggaccacatggccaaagtgtgtgaccactgttacagtgagctcaagaagagaggaggg
aatgtgtctggggcgagtggtactgacagtcctcgttctaaccgccgctccatccgcccg
ctctctgccgtcttccagaacattcaccctcccagcctgtggagacgcaagggcactgcc
tctctgacccaggtgggtgtgtcagaggagggctctatgagtgggactctgcagcgcagt
aagaggagcaagaggaactggaagaggctgtggttcctcctcaaagacaaggtgctttac
acctaccaggcccgcgaggagaaagtggcgtctgagagtttgcctctgttgggcttcaca
gtgaagctgcctgataggccagatggagaggagactaccaacgtctttgagctgtaccac
aagaagaccctgtactacacctttaaggctgaggacaatcacactgctaagagatgggtg
aacgccatggaggaagccacagttttatag
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integrated database retrieval system
