Coregonus clupeaformis (lake whitefish): 121577613
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Entry
121577613 CDS
T08357
Name
(RefSeq) limb region 1 homolog-like protein
KO
K25215
protein LMBR1L
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121577613
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
121577613
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Gene cluster
GFIT
Motif
Pfam:
LMBR1
Motif
Other DBs
NCBI-GeneID:
121577613
NCBI-ProteinID:
XP_041747284
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Position
12:38714828..38752398
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AA seq
490 aa
AA seq
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MDAPEDVSVREQLFHDRVRETIIRVLLFIGLYIVSYLVITHYKRNTEFTIDDSEDATVNK
IALCLCTFTLSVSMGTVLLLPLSILSNEVLLSFPQSYYMQWLNGSLIHGLWNLVFLFSNL
SLVFLLPFAYFFTESEGFAGSKKGVMARLYETAVVLFLLTLLVLGMVWVASAILDDNMAS
LYDLWEYYLPYLYCCISLFGVLLLLLCTPLGLSRMFSITGSLLVKPKLLEDLDETMSCAE
FEEASLSRKLTSGTSCWINVNAEVLRNRFFNIQARWIALDIWKRVSPWQRNLGYPLAMLL
LLALTVVCVLIVCYHVVELLFDETAMPRGMEDPLLGAASFSMFGSLGATVQAVLILYLMI
SSVVGFYSSPLFTGLRPRAQDTTLTQIIGNCVSLLVLSSALPVFSRTLGITRFDLLGDFG
QYNWLGNFHIVFLYNVLFAGLTSACLINTLTWTVQRELIRAFGLNILPLTVSRSTIPLRL
LLANGLSKIQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggacgctccagaagacgtgtcggtccgggaacagcttttccacgaccgagtcagagag
acaataatccgtgtcctgcttttcatcggtctctacatcgtctcctatctggtcatcacc
cactacaagaggaacactgagttcaccatagatgacagcgaagatgcaacagtcaacaaa
attgcgctgtgtctctgtacgttcactctctctgtctctatgggcactgtcctactccta
cctctctccatcttgtccaatgaggtcctgctctccttcccacagagctactacatgcag
tggcttaacggatctcttatacacggactgtggaatctagtcttcctcttctccaacctc
tccctggtcttcctcctgccctttgcctacttcttcactgagtctgagggcttcgctgga
tccaaaaagggtgtgatggcccgtctgtatgagacagcagtagtcctcttcctcctgacc
ctgctggtactggggatggtgtgggtggcatcagccatacttgatgataatatggccagt
ctttacgatctgtgggagtattacctgccttatctgtactgctgcatttccttgttcgga
gtcctgctgctgttgttatgcactcctctgggattatcgcgcatgttcagcatcacagga
agcctactggtcaaaccaaagctgctggaggaccttgacgagacaatgagttgcgctgag
tttgaagaggcctctttatccaggaaactcactagtgggacctcgtgttggattaatgtg
aatgcagaggttctgaggaaccggttcttcaacattcaggccaggtggattgctctggac
atatggaagagagtgtcaccatggcagcgtaacctaggatacccattggccatgctgttg
ctgttggctctaacggtggtgtgtgtgctcattgtgtgttaccatgtggtggagttgctg
tttgatgagacagctatgcctcgcgggatggaggaccctctcctgggcgctgcctcgttc
tccatgtttggttcgttaggggctacagtacaggcggtcctcatcttgtatctcatgatc
tcctcagtagtgggtttctacagctcaccactgttcactggactacgaccccgtgcgcag
gacaccacactgacacagattattgggaactgtgtgtctctattggtgctcagctcagct
ctgcccgtattctctaggactctggggatcacccggtttgatctgctgggagactttggt
cagtataactggctgggaaacttccacatcgtcttcctgtataacgtactgtttgctggg
ctgacctctgcctgtctgatcaacactctcacatggaccgtacagagggaactcatcaga
gcattcgggctgaatatactgccattgaccgtgtcccgctccaccatcccactcaggctc
ctattggctaatggactctcaaagattcagtga
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