KEGG   Coregonus clupeaformis (lake whitefish): 121577627
Entry
121577627         CDS       T08357                                 
Name
(RefSeq) integrin beta-7-like
  KO
K06590  integrin beta 7
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
cclu04514  Cell adhesion molecules
cclu04672  Intestinal immune network for IgA production
cclu04810  Regulation of actin cytoskeleton
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121577627
   04514 Cell adhesion molecules
    121577627
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121577627
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121577627
   04810 Regulation of actin cytoskeleton
    121577627
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    121577627
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121577627
   04515 Cell adhesion molecules [BR:cclu04515]
    121577627
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121577627
Cell adhesion molecules [BR:cclu04515]
 Integrins
  Integrin beta subunits
   121577627
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt EGF_integrin EGF_2 EGF_Teneurin EGF_TEN I-EGF_1 vWA_SIBA-E
Other DBs
NCBI-GeneID: 121577627
NCBI-ProteinID: XP_041747305
LinkDB
Position
12:39501747..39514313
AA seq 767 aa
MVGVFLLGTFLLYCVGQNQIQGVPQVCVSQPSCSACLRSPGCAWCKHKDFLKSGESTERR
CDTVESLRTRRCEQTDIINPQSELVFLKNNELSSNPDNVVQLKPQNLLFKLRVGVPQTFS
VSFKRAEGYPIDLYYLMDLSFSMRDDLETIKNLGQDILSTLKNVTKKVRIGFGSFVDKVA
LPYVSQVKDKKNNPCPSRLNTCQPAFSFQNILGLTQDVAEFKARVSNQIISGNLDSPEAG
FDAIVQAAVCQGVIGWNNVTRILVYTSDDTFHIAGDGRLAGIFEPHDGKCHLNGSGFYEG
TKYDYPSVGQLTRVLADNNIQLIFAVTEDSVAAYKALSKLIPQSVLGVLKNDSSNVVQLI
SEAYNNLSSTMLLEHHGAPSGLDVTYRSHCTPGEGDNTPWQRRGECMNIKLNQQVDFTVS
LNISTSDGECLKEKKQFFLKLQGISETLKVSVETLCDCDCHDREQQSTHCNEKGMITCGI
CSCDEGHLGQRCECEQPKDMISADSMDATCRQDNSSLLCSRHGSCECGICVCQGTHRGDF
CQCDDNSCARHNNMLCGGNGQCDCGTCKCHTNYTGSACDCSTRTDQCRTAGKLCNGQGTC
LCNQCQCNKDLFGMNCSKIANACPKFLACVTCELAIKESDGLKSNCSRPCGSVKPTWVEG
PQEFPCREDTISYKVELFPDGNILVLYADLPRSVDKTYVIIGSSVSSIIFISIAVILISR
LMLELHYRREYASFLKATETEVWKDTNNPLFQDATTTVMNPIHIQED
NT seq 2304 nt   +upstreamnt  +downstreamnt
atggttggcgtctttctattaggaacctttctcttgtactgtgtcggacagaaccaaatt
caaggggtcccccaagtatgtgtgtcccagccctcatgttcagcctgcctgaggagcccg
ggatgtgcctggtgcaaacacaaggacttcctgaagtctggggagtccactgagcggagg
tgtgacactgttgagtctcttaggaccaggcgctgtgagcagacagacatcatcaacccc
caatcagaactggtcttcctgaagaacaatgagctcagcagcaacccagacaacgtggtc
cagcttaagccacaaaacctcctcttcaaactcagagtcggagtccctcagaccttcagt
gtgtcattcaagagagccgagggctaccccatagacctgtactacctgatggacctgtcc
ttctccatgagggacgacctggaaaccatcaagaatctgggccaggacatcctctctact
ctgaaaaacgtaaccaagaaggtccgcataggctttggctcatttgtggacaaggtggct
ctgccgtacgtcagccaggttaaggacaagaagaacaacccctgccccagccgcttgaac
acctgtcaacctgccttcagcttccagaacattctgggattaacccaagatgtggcagag
ttcaaggccagggtcagcaaccagataatctctggaaacctggactcccccgaggctggc
tttgacgccatcgtgcaggcagctgtctgccagggtgtgattggttggaacaatgtcacc
cggatcctggtctacacgtcagatgacaccttccacattgccggggacggcaggctggct
gggatattcgagcctcatgatgggaagtgccatctcaatggcagcggcttttatgaaggc
actaaatatgactacccttcggttggccagctcaccagggtcctggcagacaataacatc
cagctcatctttgctgtcaccgaggacagtgttgctgcctacaaggcattgagtaaacta
atccctcagtcagtgctgggagtcctgaagaacgactccagcaacgtggtccagctcatc
tcagaggcctacaataacctgtcctccactatgttactggagcaccatggagctccttca
ggtctggacgtgacctacagatcccactgcacccctggagaaggggacaacaccccgtgg
cagaggaggggcgagtgcatgaacatcaagctcaaccagcaggttgacttcacagtgagt
ctgaatatttcaacgtctgacggagaatgtctgaaggagaagaagcagtttttcctcaaa
ctgcagggcatcagcgagaccctgaaggtctctgtggaaaccctgtgtgactgtgactgc
catgatagagaacagcagtccacacactgcaatgaaaagggaatgatcacctgcggaatc
tgcagctgtgacgagggtcacctgggtcagaggtgtgagtgtgagcaacctaaggacatg
atctctgccgactctatggacgcaacatgtcgccaagacaactcctcgctgctatgcagc
aggcacgggagctgtgagtgtggcatatgtgtgtgccagggcacccaccgcggtgatttc
tgccaatgtgatgacaacagctgtgcccgccacaacaacatgctctgcggtggtaatggg
cagtgtgactgcggaacatgtaagtgtcataccaactacacaggctctgcgtgtgactgc
tccacccgaaccgaccagtgcaggactgctgggaagctgtgcaatggccagggaacatgc
ctgtgtaaccagtgccagtgcaacaaagacttatttggcatgaactgctcaaagattgct
aatgcatgcccaaaattcctggcctgtgtgacgtgtgaattggccattaaggaaagtgac
ggcctaaagagtaactgcagccgaccatgtggctcagtcaagccgacttgggtggaggga
ccacaggagttcccctgcagagaagacaccatctcctacaaagtggagctgttccctgac
ggcaacatcctggtcctctacgcagatctgccccgctctgttgacaagacttacgtgatc
attggcagctcggtgtccagcatcatcttcatcagcatcgcagtgatcctcatcagtagg
ctgatgctggagctccactaccggagagagtacgccagcttcctcaaagcaacggagacc
gaagtctggaaagataccaacaatcccttgttccaggatgccacgaccacagttatgaac
cccatacacattcaagaggactga

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