Coregonus clupeaformis (lake whitefish): 121577631
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Entry
121577631 CDS
T08357
Name
(RefSeq) interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121577631
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121577631
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
121577631
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121577631
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
121577631
NCBI-ProteinID:
XP_041747309
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All DBs
Position
12:39631610..39636119
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AA seq
478 aa
AA seq
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MAVTPRRVRLKPWLVAQVDSGLYLGLVWIDRDNKRFRIPWKHATRHTPQHEEENTIFKAW
AVETGKFQEGIDDPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDICDIPQPL
SNPGSSDPGSWTPNDGDEDESDTPEPLPPYPTSNGTSPALMWSPPGSVSPLQPPSCPPSV
EVWPKKEPLDVEMQPSPLEMPPPPPLDMPPPLMPDMMFASPEMWISSLPMTDLELQFQYR
GKEVCPAMTVSNPQGCRLFYGDLGPMVNQEELFGPISLEQLRFPSTEHIANNTQRVFTNR
LLDVMDRGLVLEISGHDIYAVRLCQCKVYWSGPCAPNPNAPNLIERQRKIKLFCLESFLS
DVIAHQRGQSASPPQFDINLCFGEEWPDSRPRERKLIMVQIIPVVARMITEMFSGDCMRS
FDSGSVRLQISIPDIKDNIVTHLKQLYRLLQTHQGQEGWPQALPPGAGMHLPQALHAQ
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaccccgcggcgtgtccggctcaagccctggctagtggcccaggtggacagc
gggctctaccttggcctggtgtggattgaccgggacaacaagcgcttcaggatcccctgg
aaacacgctacacggcacaccccccagcatgaggaagaaaacacaatttttaaggcctgg
gcggtagagacaggaaagttccaggagggtattgatgatcctgaccctgccaagtggaaa
gctcagctccgctgcgccctcaacaagagccgagagttcaaccttgtctacgacggcacc
aaagaagtccccatgaaccccctgaagatctatgacatctgcgacatcccacagcccctc
agtaacccaggatcctcagaccctgggtcttggacaccaaatgatggggatgaagatgaa
tcagataccccagagcccctccctccttatccaacatccaatggcaccagccccgctctt
atgtggtctcctccggggtcagtatcgcccctacaaccccccagctgccccccatcagtt
gaagtgtggcccaaaaaggagcctttggatgtggagatgcagccctcccccctggagatg
cccccccctcccccactggacatgcctccccctctcatgcctgacatgatgttcgcctcc
ccagagatgtggatcagctccttgcccatgacagacctggagctgcagttccagtaccgg
ggtaaggaggtgtgtccagccatgacggtcagtaacccccagggctgccggctgttttac
ggggacctgggccccatggtcaaccaggaggagctgtttggccctatcagcctggagcag
ctgaggttcccctctaccgagcacatcgccaacaacacacagagggtcttcaccaaccgc
ctgctggacgtcatggaccgaggccttgtcctggagatcagcggccatgacatctatgcc
gtccgcctctgccagtgcaaggtgtactggtcaggcccctgtgccccaaaccccaacgca
cccaacctcatagagaggcagaggaagatcaagctgttctgtctggagtcctttctcagc
gatgtgatagcccatcagaggggccagtcggccagccctcctcagttcgacatcaacctg
tgctttggagaggagtggcctgacagcagacccagggagaggaagctcatcatggtgcag
atcatccctgtggtagcacgtatgatcactgagatgttctcaggtgactgcatgcgctcc
ttcgacagcggcagcgtgcgcctgcagatctccatcccagacatcaaggacaacatcgtg
acccacctaaagcagctctaccgcctgctgcagacccaccagggtcaggaaggctggcct
caggctctgcccccaggagccggcatgcacctgccccaggccctgcatgcccagtga
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