Coregonus clupeaformis (lake whitefish): 121577646
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Entry
121577646 CDS
T08357
Name
(RefSeq) serine/arginine-rich splicing factor 3 isoform X1
KO
K12892
serine/arginine-rich splicing factor 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121577646
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121577646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121577646
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
SR proteins
121577646
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121577646
NCBI-ProteinID:
XP_041747342
LinkDB
All DBs
Position
12:40003223..40011541
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AA seq
170 aa
AA seq
DB search
MADPAMHRDCPLDCKVYVGNLGNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLSGSRVRVELSNGEKRTRNRGPPPSWSRRPRDEHRGRRGSPPARRR
SPRRRSFSRSRSRSLSRDRKRERSLSRDRNHKPSRSFSRSRSRSRSTERK
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccagccatgcaccgagattgccctctcgactgcaaggtctatgtgggaaac
ctggggaataatggcaacaagacagagctggagaggtcctttggctattatggaccactt
cgcagtgtctgggtagcaaggaaccccccaggctttgcttttgtggaatttgaagatcca
agggacgcaacagacgcagtgagggagcttgatggaaggacactaagtggttctcgtgtg
cgagtggagctgtccaatggtgagaaacgcacccgcaaccgaggtcctcctccctcatgg
agcagacgtcctcgagatgagcatcgcgggcgtcgtggtagcccgcccgccaggcgcaga
tccccacgtaggaggagcttcagccgcagccgaagcaggtctctctccagagacaggaag
agggagagatctctgtcccgggacaggaaccataaaccctcaagatcattctctcgatca
aggagccgctccagatctactgagagaaagtaa
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