Coregonus clupeaformis (lake whitefish): 121577694
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Entry
121577694 CDS
T08357
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121577694
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GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
121577694
NCBI-ProteinID:
XP_041747408
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Position
12:complement(53068170..53092103)
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AA seq
814 aa
AA seq
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MTPLYCIAVAWLFTSALCEDFCKKANFFGGAHTFVKTPRPRDPPVLSGHNINTRSTDPDG
ETCKSLTGFESTLKNNTHTYAFNDLSGSVSLAWVGDGTGVLLVLTTFQVPVFMIRFGQSK
LYRSQDYGKTFQDVTHLINNTFVQTEFGIAIGPDNSGRVIMTGDVSEGGGSRIFRSLDFG
HSFSPADLPFFPLIQTLYNPNDSNVLLTLSITLDLWLSEDFGSTWRKIHDSVCLVRWGPV
DSIYFTTNSNGSCNDKGMLELKRSLDYGKNIKTIASKIYSFVLGGRFVFASIMTGSGTQR
MIHVSVDGGDLWNMAQLPTVGHEQFYSILAASDDMVFMHVDEPGDTGIGTIYISDDRGTL
YSKSLERHLYTATGGDTDFTNVTSLRGVYMTSVLTEDGSVETVVSFDQGGEWRPLQRPRN
SPCDAETTTNRPDRCSLHIHALYSISMKMNVPLLPLTQSNAIGLILAHGSVGDPASVLSP
DVYVSDDGGYSWLRALTGPHHYAILDSGGLLVAVEHTSAPVNQIKFSTDEGQCWHVYNFT
SEPLYFTGLALEPGARSMILSLWGYRVGLQGPLSQYWVSVTIDFKQLLSTDCGEGDYVQW
LAHSDDLSNPSDGCILGYKEHFLRLRKDSVCWNGRDYVITTQPTPCPCTLDDYQCDYGYY
RAENSSECVEQADLKGHVLEFCLHGTTEQLQTSGYRKIPGDRCEGGIQPKRKEIDLRRNC
ISNALHPKPLTEANLLSSASIVLVVMVILLISAATGVMLIKKYVCGGRFLVHRYSVLQQH
VEANGIEGVDELDTHTTEMGKTHYHEDSDEDLLE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgactccgctgtattgcatcgctgttgcctggttatttacctctgcactatgcgaggat
ttctgtaagaaagccaacttcttcggcggggcacacacgtttgtgaagaccccgagaccg
agagatccaccggtgttgtcgggacacaacattaacacacggagtactgaccccgacgga
gagacgtgcaaatctctaacgggattcgaatccacgctaaaaaataacacacacacctat
gccttcaatgacctgagtggctcagtgtctctggcctgggtgggagatggcacaggggtg
cttctcgtgctgaccacattccaggtgcctgtcttcatgattcgctttggccagtctaaa
ctctaccgcagccaggactatgggaagacattccaggacgtgacccacctgatcaacaac
acctttgtccagactgagtttggcatcgccattggtcccgacaactctggcagggtgatc
atgacaggtgatgtgtcagagggagggggatctcggattttccgctcgctggattttgga
catagtttttccccggcggacctccccttctttcctctgattcagacactgtataacccc
aacgacagtaacgtgctactgaccctcagcatcacgttggacctgtggctgtctgaagac
tttggctccacctggaggaagatccatgacagcgtgtgtctggtcagatggggtcctgtg
gacagcatctacttcaccacaaactctaatggatcctgcaatgataagggcatgttggag
ctgaagaggtctctagactatggcaagaacatcaagaccatcgccagcaagatctactcc
ttcgtactgggaggacgcttcgtctttgcctccatcatgactggctcgggtacccagcgt
atgatccatgtgtcagtagatggtggtgacttgtggaacatggctcagctccctaccgtc
ggccatgagcagttctactccatattggcagccagcgacgacatggtgttcatgcacgta
gacgaacctggagacactggcatagggaccatctacatatcagatgacagaggaacgctc
tactccaagtctctggagcgccacctctacacggccacagggggcgacactgacttcacc
aacgtcacctcgctcaggggcgtctacatgaccagcgtactcacagaggacggctcagtg
gagactgtggtgtcgtttgaccaggggggggagtggcggccgctacaaaggcctcggaac
agcccctgtgacgctgagaccaccaccaaccgtccggaccgatgcagcctgcacatccac
gccttatacagcatctctatgaagatgaacgtccctctactgcccctcacacagtccaac
gctataggcctcatcctggctcatggtagtgtgggtgacccagcgtctgtgctgtctcct
gatgtgtatgtgtctgatgatgggggctactcctggctgagagcattaaccggaccccac
cactatgccatcctagactctggaggcctattggtggctgtcgaacacacatctgcaccc
gtcaaccagatcaagttttccacagacgagggccagtgttggcatgtgtataacttcacc
agtgagccgctgtatttcacagggctggcgttggagcctggagcccgctctatgatcctc
agcctgtgggggtacagagtgggcctgcagggtcccctcagccagtactgggtctctgtt
accatcgacttcaaacagctactctccacagactgtggggagggggactacgttcagtgg
ttggcgcactctgatgacctcagcaaccccagtgacggatgcattctgggatataaggag
catttcctgcggctgaggaaggattctgtctgctggaacggacgtgattatgtcatcacc
acccagcccaccccctgcccctgcacgctggacgactaccagtgtgactatgggtactac
cgtgcagagaacagttctgagtgtgtggagcaggcagacctgaagggccatgttctggag
ttctgtcttcacggcaccacagaacagctgcagaccagcggctaccggaagattccaggc
gaccggtgtgagggcgggatccagcctaagaggaaggagattgatctgaggagaaactgc
atcagcaatgcactccacccaaaacccctgacggaggccaacttgttaagctctgcctct
atagtactggttgtaatggtgattctgctcatcagtgctgccacaggggttatgctcatc
aagaaatatgtctgcggagggaggttcctggtacacagatactcagtgctacagcagcat
gtggaggccaatgggatagagggagtggatgaactggacacacacaccaccgagatgggc
aaaacacactaccacgaagactcagatgaggacctcttggagtga
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