Coregonus clupeaformis (lake whitefish): 121577745
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Entry
121577745 CDS
T08357
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 2
KO
K24609
leucine-rich repeats and immunoglobulin-like domains protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
ig
Ig_2
LRR_4
LRR_5
LRR_1
V-set
C2-set_2
LRR_9
LRR_14
C2-set_3
C1-set
LRR_6
LRRCT
Syndecan
Motif
Other DBs
NCBI-GeneID:
121577745
NCBI-ProteinID:
XP_041747530
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All DBs
Position
12:10106394..10115477
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AA seq
1073 aa
AA seq
DB search
MAEAWPRPPALFLLLSLSACWEVDSCPAPCSCTRGSDEIQILDCNRKRLSVAPLDPPHGI
THLTMNHNDLTTVPYLGEVTSNITTLLLVHNLISELSMHQLQPYIYLETLDLSSNSISEI
KAGAFPPMQLKYLNLSNNKISILEPGCFDNISNSLLVLKLNRNRITMLPYKVFRLPQLQF
LELKRNKIKIVDSLTFKGMDLLKSLKMQRNGITKLMDGAFFGLNNMEELELEHNNLTEVN
KGWLYGLRMLRVLRISQNAIGIIRPDAWEFCQNLEELDLSFNHLTRLEETAFSGLGLLEN
LNLGDNSVSHLGEGVFSSLANLHSLDIRNNEISWAIEDSIGVFVGMKKLNTLILQRNKIK
SITKKAFEGLEELEHLDLSKNGIMSIHPDSLSHMKLKVFFLNTSSLLCDCQLQWLGPWLT
DNHFLQSVSAMCAHPASLLGRNVLSVSLEELVCDYFPKPRITEHPETATALRGTNVTLSC
LASSSSDSPMTTAWRKDGEVLYEAEMQNYARYQEGELVYTTVLHLLNVNFTDEGRYQCVV
SNHFGANYSNRAKLTVNELPSFLKIPMDLTIRTGTMARLECAAEGHPSPQIAWQKDGGTD
FPAARERRMHVMPDDDIFFIANVKTEDMGVYSCTAQNAAGSLSANATLTVLETPSLMRPL
EDRMVARGETAVLQCIAGGSPAPRLNWTKDDGPLVLTERHFFAAANQLLIIVDAGPADTG
KYTCIMSNTLGTERGHIYLSVSPSPNCDTAGGLDQDGWTTVGIVVIVVVCCVVGTSLVWV
FVIYHMRRKSEDYSITNTDELNLPADIPSYLSSQRTLSEPQEGYSNSEAGSHQQLMPPLS
NGYVHKGTDGVCYGDTGSEVDTEANGMLHCHVGSLFTGRSSFHPGEPREGLAGVPTGGAG
PLVICSDCYDNANIYSRTREYCPYAYLAEDDPLDKDLSGIMTHLPKEPYREQHAQHEDTA
LESLINNQDSSVFLTSHDLTKRLSTALSPPEQHYSTDVPSRSFWGKGEDLSTVPQPGLSQ
QPVNVHKTPHVSSVGVGGEERSGEGDASLSQSTQDHRSASYRTKPQEHTHSPT
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcctggcccagacccccggccctctttttgttgttgagtttgagtgcctgc
tgggaagtggattcctgccctgctccatgctcttgtacgaggggatcagacgaaatccaa
atcctggattgcaataggaaaaggttgtccgtggcccccctggatccacctcacgggatt
actcatctcactatgaatcacaatgatctgacaactgttccataccttggagaagttacc
tcaaacatcacaacactcttattggtccacaacctgatctcagaactgtcgatgcatcag
ctgcagccatacatctacttggagacacttgacctgtcatctaactctatctcagagatc
aaggctggagccttcccaccaatgcagctgaaatacttgaatttaagcaataacaagatc
agtatccttgaacctggctgctttgacaacatttccaactccctgctggtcctgaagctg
aacaggaacagaataacaatgctgccgtacaaagtattcaggcttccccagctgcagttt
ctggaattaaagcgcaacaagatcaagatagtggacagcctgaccttcaaagggatggac
ttactgaaatcactgaagatgcagcggaatggcataactaagctgatggacggtgctttc
tttgggctgaacaacatggaggagctagagctggagcacaacaacttgacggaggtcaac
aaaggctggctgtatggcctgcgcatgctgcgtgtcctgcggatcagccagaacgccatc
ggcatcatccgaccagacgcctgggagttctgccaaaatctggaggaactggatctgtcc
ttcaaccacctgacccggctggaggagacggcgttcagtggactgggtcttctggagaac
ctgaacctgggagataactcggtcagtcacctgggagagggagtcttcagcagcttggcc
aatctgcactcactagacatacggaataatgagatctcttgggccattgaggactccatt
ggtgtgtttgttggaatgaagaagctgaacacattgattctccagcggaacaagatcaaa
tctatcacaaagaaggcctttgagggtctggaggaactagagcacctagacctgagcaag
aatgggatcatgtccatccaccctgattctttgtctcacatgaagctgaaagtctttttc
ctgaacactagcagcctgctgtgtgactgccagctgcagtggctgggcccgtggttgact
gacaaccacttcctgcagtctgtctcagctatgtgtgcccaccctgccagcctgctgggc
cgcaacgtcctgtctgtcagcctggaggagctcgtctgtgattacttcccgaagccccgg
atcactgagcaccctgagactgccaccgccctgcgtgggaccaacgtgactctgagctgc
ctggcgtccagcagcagtgactcccccatgaccacggcctggaggaaggacggggaggtg
ctgtacgaggcagagatgcagaactacgcccgctaccaggagggagagttggtctacacc
accgtgctgcacctgctcaacgtcaacttcacagacgagggacgctaccagtgtgtagtc
tccaaccattttggtgccaactactccaaccgggccaagctcacagtcaatgagctaccg
tccttcctgaagatacccatggatctgaccatccgtacaggcaccatggccagactggag
tgtgccgccgagggccacccctcaccccagattgcctggcagaaagacgggggcacagac
ttccctgctgcccgggagaggaggatgcacgtaatgcctgacgatgacatcttcttcatt
gccaatgtaaagactgaggacatgggggtgtacagctgcacagcccagaatgctgcagga
agcctgtcagccaacgctacactcactgtgctagaaacgccgtcattaatgcgtcctctg
gaggacaggatggtagctcgtggggagacggcggtgctccagtgtatagcaggaggcagc
cctgcgccccgtctcaactggaccaaggatgacgggcccctggtcctcacagagcgtcac
ttctttgctgccgccaaccagctactcatcattgtggatgcggggccggcggacaccggg
aagtacacatgcatcatgtccaacacgctgggcactgaacgcggccacatctacctcagc
gtgtcgccatcgcccaactgtgacacggccggtggcctcgaccaggacggctggaccacg
gtgggcatcgtggtgatcgtggtggtctgctgcgtggtgggcacctcgctggtctgggtc
ttcgtcatctaccacatgcgacggaagagcgaggactacagtataaccaacacagatgag
ctgaacctgccggcggacatccccagctacctgtcctctcagcgcacgctgtcggagcct
caggagggatacagcaactctgaagcagggagccaccagcagctcatgccaccactgtcc
aatggctatgtccacaagggcactgacggtgtgtgttatggtgacacaggcagcgaggtg
gacaccgaggccaacgggatgctacactgccacgtgggctctctgtttacgggacggagc
agcttccatcctggggagccccgcgagggactggctggggtgcctacaggtggtgcaggg
ccgctggtcatctgctcggactgctacgacaacgctaacatctactctcgaacccgggag
tactgcccctacgcctacctggccgaggatgaccccctggacaaggatctctctggcatc
atgacccacctccccaaggagccctacagggagcagcacgcccagcatgaggacacagcc
ctggagagcctcatcaacaaccaggactcctcagtcttcctcaccagccacgaccttacc
aagaggctgagcacagccctcagccccccagaacaacactacagcaccgatgttccctcc
aggtcgttttggggcaaaggagaggacttgtctacagtgccccaaccaggtctgtctcag
cagcctgtgaatgtgcacaagactccccacgtgtcttcagttggtgtgggaggagaggag
aggagtggagagggggatgcctccctttcccagagcacacaggaccacagaagtgcctct
tataggactaagcctcaagagcacacccactcccccacataa
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