KEGG   Coregonus clupeaformis (lake whitefish): 121577810
Entry
121577810         CDS       T08357                                 
Name
(RefSeq) lysine-specific demethylase 5B-B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121577810
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121577810
Enzymes [BR:cclu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121577810
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121577810
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121577810
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 PHD-1st_NSD
Other DBs
NCBI-GeneID: 121577810
NCBI-ProteinID: XP_041747648
LinkDB
Position
Unknown
AA seq 1490 aa
MTQSRPNEFIAPPECPVFEPTWEEFADPFAYINKIRPIAEKTGICKVRPPKEWQPPFACD
VDRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKNLDLYQLNKLV
NDDRGFDAVCRERRWSKIALKMGFAPGKAIGSHLRSHYERILYPYNLFQTGANLLKPTLT
NDTKDMDYIPHDLPQRQSVQPLETCSIARRAKRMRAEGGCMKFETEDDCENRPNLRRRMG
SYVAKPEPQPVEVKLEPTEHEEPITSDKESVLAKKNDPAVSKVDQYMCLVCGSGSEEDRL
LLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECGKPQVAFGFEQAGRDYSLRTFGD
MADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPIRGGR
FQVSPEDENYLSSGWNLNNMPVIDSSVLTHVTADICGMKLPWLYVGMCFSSFCWHIEDHW
SYSINYLHWGEPKTWYGAPGYAAEKLEGVMRKLAPELFESQPDLLHQLVTIMNPNTLMNH
GVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTMDWMPMGRMCVDHYRQLNRY
CVFSHDEMVCKMTSKADTMDVALASAVQRDMTVMLQEEDKLRDKVRKMGVQQSQQVEYDL
LPDEERQCSKCRTTCYLSALTCPCNPGQLVCLHHAQDLCSCPPNNLTLNYRFTMAELYPM
MEAVTLRAESYTGWVSHVSNILEAKQDRKSSLEVLRSLVEEAEVKQFPKSDLLRQLCTVS
LDAEKCAVVAQQLLNGKRQTRYRSGGGKSQSQNLLTVEELRLFVRQLHNLPCSIRQAPLL
MDLLTRVDDFQQRSERLLCDGAPSPAELQTLLDVSLGLDVELPQLVPLRERLEQARWLEV
VQGASSQPHSLCLDTMRRLIDQGVGLAPHALVEKAMARLQELLTMSEHWEERALGLMEAR
PCHCVETLEATLQEVDSIPAYLPNCLLLKDTVDQAKDWLQEADTLQLGGRIPVLDTLTDL
VSRAKAIPVWLDPLARLEALVSDVQAWKESAAKTFLMKNSPYSLLEVLCPQCEGGTGSQK
SKSKRAKDAAQCSKRNETLLDCLSDVERALLESKDSASAMATLAEVRQKEMESLLALRAS
NESKLLPAGDCGALRVCVCHKAPLGAMLQCELCSDTFHRSCVSGSNQDPRPNQAWLCPHC
RRSEKPPLDRVLPLLASLQRIRVRLPEGDALRFLIERTVRWQHRVQQASAEGVLGEGVAV
MTSHQRWGSSSPTWVPSQETYSASFYTDHQCIPLQGLSPELEELMVEGFLLQVTLPETQQ
LYMSLLSRLASHNHTDSPSPQHSTEQDQHKHNSQGGSPPHNQNGVACLKKEAMNGKRTKR
HMEKEGSERKDKAKKPRKKKPKMERSQGAKGTCSPTTTHSDLSLSDSDEDFTLCAAPWCR
EPEGKQVNWVQCDGSCQQWFHQICVGVSAKQAEKEDYICISCTQPDHTRE
NT seq 4473 nt   +upstreamnt  +downstreamnt
atgacccaatctcggcccaacgagttcattgctccaccggagtgtcctgtttttgagccc
acttgggaggaatttgccgacccatttgcgtatatcaacaaaatacggcctattgcagag
aaaacgggtatctgcaaggtccgaccgccgaaggaatggcagccaccgtttgcgtgtgat
gtggacagactgcacttcacgccccggatccagagacttaatgaattggaggctcaaacc
agagtcaagctcaacttcctggatcaaatcgcaaagttctgggagctacaagggtgcacc
ctgaaaatccctcatgtggaaagaaagaatctggacctgtaccaactcaacaagttggtg
aacgatgaccggggttttgacgcggtttgcagagagagacgctggtctaagatagcccta
aagatgggctttgctccaggcaaggccataggctctcatctgcgctctcactatgagagg
atcctctacccctacaacctgttccagactggagccaaccttctgaagcctactctgact
aatgacaccaaggacatggactacatcccccatgacctgccccagcgccagtctgtccag
cccctggagacctgcagcattgctcgcagagccaagcgcatgagagctgagggaggctgt
atgaagtttgagaccgaagatgactgtgagaaccgtcccaacctgaggaggaggatgggt
tcctacgtggccaagccagagccacagcctgtggaagtgaaactggaacccactgagcac
gaggagccaataacaagtgacaaagaaagtgtgcttgctaagaaaaacgaccctgcagtg
agtaaagtggatcagtacatgtgtctggtgtgtggcagcgggagtgaagaggaccgcctg
ctgctgtgtgatggctgtgacgacagctaccacaccttctgtctgatcccgcccctccac
gatgtccccaaaggagactggagatgtcccaagtgcctggctcaggagtgtggcaaaccc
caggtagcctttggcttcgagcaggctggcagggactactccctacgcacttttggggac
atggccgactccttcaagtcagactatttcaacatgccggttcatatggttcccacagag
ctggtggaaaaggagttctggcggctggttagcaccatcgaggaggacgtcactgtggag
tatggagcagacatcgcctccaaggagtttgggagcggcttccccatcaggggcggacga
ttccaagtctcccctgaggatgagaattacctgagcagcggctggaacctgaacaacatg
cccgtgatagactcctcggtgctgactcacgttacggccgacatctgtgggatgaagtta
ccatggctctacgtgggcatgtgcttctcctccttctgctggcacattgaggaccactgg
agctactccatcaactacctgcactggggagagcccaagacgtggtacggcgctccgggg
tacgctgcggagaagctggagggggtgatgaggaaactggcccccgagctgtttgagtct
caacctgacctcctgcaccagctggtcaccatcatgaaccccaacacactgatgaaccat
ggtgtccccatctatcgcaccaatcagtgtgctggtgagtttgtcatcaccttccctaga
gcctaccacagcggatttaaccagggcttcaacttcgctgaggctgtcaacttctgcacc
atggactggatgcccatgggccgcatgtgtgtggaccactacagacagctgaataggtac
tgtgtcttctcccatgacgagatggtctgcaagatgacgtccaaggcggacaccatggac
gtggccctggcctcggccgtgcagagggacatgaccgttatgctccaggaggaggacaag
ctgagggacaaagtccgcaagatgggcgtgcagcagtcccagcaggtggagtacgacctg
ctgccagacgaggaacgccagtgttccaagtgcaggaccacctgctacctgtctgccctc
acctgtccctgtaaccccggccagctggtgtgtctgcaccatgcccaagacctctgctcc
tgcccccccaacaacctcacactcaactacaggtttaccatggctgagctctaccccatg
atggaagcagtcactctgcgtgccgagtcctacacaggctgggtctcccatgtcagtaac
atactggaggccaaacaagacaggaaaagcagcttggaggtactgcgctccctggtggag
gaggcggaggtgaagcagttccctaagagtgacctcctgcggcagctctgcactgtttcc
ctggatgctgagaagtgtgccgtggtggcccagcagctgctcaatgggaaaaggcagacc
aggtatcgttcaggtggagggaagtcccagagccagaacctgctgacggtggaggagctc
aggttgtttgtcaggcagctgcacaacctgccctgcagcatccgccaggcccccttactc
atggacctgcttacccgcgtggatgacttccagcagcgcagcgagcggctcctctgtgac
ggggcccccagcccagcggagctgcagaccctgctggacgtgagcctcggtctggatgtg
gagctgccccagctggtcccgctcagggagaggctggagcaggcgcgctggctggaggtg
gttcagggggccagcagccagccccacagcctctgtctggacaccatgcggaggctgata
gaccagggggtgggtctggccccgcacgccttggtagagaaagccatggcgcgcctgcag
gagctgctcaccatgtctgagcactgggaggagcgggcgctcggcctcatggaggccagg
ccctgtcactgtgtggaaactcttgaggcaactctgcaggaggtggatagtatccctgcc
tatctgcccaactgtctgctgctgaaggacacggtggaccaggctaaagactggcttcag
gaagcagacaccctgcagctgggaggccgtatccctgtactggataccctgactgacctg
gtgtcccgggccaaggccatccctgtctggctggaccctctggctcgactggaggccctg
gtctctgacgtgcaggcctggaaggagagcgccgccaaaacctttctaatgaagaattcc
ccttactccctgctggaggtgctgtgcccccagtgtgagggtgggacggggtctcagaag
tcaaagtctaaaagggcaaaggatgcagcccagtgcagcaagagaaatgaaactttgctg
gactgcctgagtgacgtggagagggcccttttagagagcaaggactccgcctctgctatg
gccactctagccgaggtgcgtcagaaggagatggagagtctgctggctctcagggcctcc
aatgagtccaagctcctcccagcgggcgactgcggggcgttgagggtgtgcgtgtgccac
aaggccccgttgggagccatgctgcagtgcgagctctgcagtgacacctttcaccgcagc
tgtgtctcaggctccaaccaggacccccggcccaaccaggcctggctgtgcccccattgc
cggcgctcggaaaagccacctctggaccgggtgcttcccctgctggcctccctgcagcgc
atcagggtgcggctgcctgaaggcgatgccctacgcttcctcattgagaggacggtccgc
tggcagcaccgcgtgcagcaggcctccgcagagggggtgctgggggagggggtggctgtg
atgacatcacatcagcgctggggctcatccagtcccacctgggttccatctcaggaaaca
tacagcgcatcattttacacggatcaccagtgcattcctctgcaaggactgagccctgag
ctggaggagctgatggtggagggcttcctgctgcaggtgactctgcctgagacccagcag
ctgtacatgtccctcctcagcagactggcctcccataaccacacagacagcccctccccc
cagcacagcacagagcaggaccaacacaagcacaactctcaaggagggagcccccctcat
aaccagaacggagtagcctgtctcaagaaggaggctatgaatggcaagcggaccaagcgg
cacatggagaaggagggttccgagcgcaaggacaaagccaagaagccccgcaagaagaag
cccaagatggagaggagccagggggccaaggggacctgttcacccaccaccactcactct
gacctctccctgtcggactctgatgaagacttcaccctgtgcgctgcaccgtggtgccga
gagccagaggggaaacaggtgaattgggtccagtgtgacggcagctgccagcagtggttc
caccagatctgtgtgggagtgtctgcaaagcaggcagagaaagaggactacatctgtatc
agctgcacacagccagaccacaccagggagtga

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