KEGG   Coregonus clupeaformis (lake whitefish): 121577814
Entry
121577814         CDS       T08357                                 
Name
(RefSeq) negative elongation factor D isoform X1
  KO
K15181  negative elongation factor C/D
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121577814
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121577814
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     121577814
SSDB
Motif
Pfam: TH1 DUF4817
Other DBs
NCBI-GeneID: 121577814
NCBI-ProteinID: XP_041747656
LinkDB
Position
Unknown
AA seq 579 aa
MDEEYYERNIGDWDGPDGNQDDYIEGENDGKVQEDCLQKFSSRDYIMEPAVFNTLKTYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEDNLEKNLPEFAKMVCHGEHTYLFAQAMMSIMSQE
EQGGSAMRRIGQEVQKSAHQRGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELSTLYQCIRFPVVSMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLIKLFETEHSQLDVMEQME
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDPVVEFIAHCKSNFIMMN
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggacgaggaatattacgagaggaatattggagactgggatggtccggatggcaatcaa
gacgactatattgaaggggagaacgatgggaaagttcaggaggactgcctacagaagttt
tccagcagagattacatcatggagcctgctgtcttcaacacccttaaaacgtatttccag
gctggtggctcccctgaacacgtcatccagctcctgtcggagaactactcagctgtggcc
cagactgtcaacctgctggcagagtggctcatccagatgggtgtagagccagctcaggtg
caggaacgggtagagaatcacttgaagagtctcctgatcaagcactttgacccccagaag
gctgactccatctttaccgtcgagggagagactcctgcctggttggaacagatgatcgcc
cacaccacctggagagaccttttctacaagctggccgaggcccacccagactgtctgatg
ctcaacttcactgtcaagctcatctcagacgcaggctaccagggggagatcaccagtgtg
tccacggcgtgccaacagctggaggtgttctccagggtcctgaggacctctctggccaca
ctgctggatggaggtgaggacaacctggagaagaacctgccagagttcgctaagatggtg
tgtcatggggagcacacttacctgtttgcccaggccatgatgtccatcatgtctcaggag
gagcagggggggtcggccatgcgcaggatcggccaggaagtacagaagtctgcacatcag
aggggccatgatgccagtcagatcaccctggcattgggcacagcagcagcctaccctcga
gcctgccaggccctgggtgcaatgctgtccaaaggggcactcaaccctgccgacatcact
gtgctcttcaagatgttcagcagcatggacccacctcccgtagagctgattcgagtgcct
gccttcctggacctgttcatgcagtcgctgttcaagccaggctccaagatcaaccaggac
cataaacacaaatacattcacatcctggcctacgctgccagtgtggtcgagacatggaaa
aagaacaagcgagtgaacatcaacaaggatgagctcaagtccacctccaaggccattgag
acggtccataacctgtgttgcaatgagaacaaaggagccacagagctggtggctgagctc
agcactctgtaccagtgcatccggttcccggttgtttccatgggggtgctgaagtgggtt
gattggacagtctctgagcctcgctacttccagctccagacagaccatacccctgtccat
ctagcacttctggatgagatcagcacctgtcaccagctcctgcacccacaggtcctccag
ctgctgatcaagctatttgagacagaacactcccagcttgatgtcatggagcagatggag
ctgaagaagaccctgttggatcgtatggtccacctgctgagtcggggctacgtgctgcct
gtggttggatacatccgcaagtgcctggagaagctcaacacagacatctctctcattcgc
tattttgtaacagaagtgttggatgtgattgcccctccatacacttcagacttcgtccag
ctgttcctgcccatcctggagaacgacagcatcgctggaaccattcggacagagggagaa
catgaccctgtcgtggagttcatagctcactgcaaatccaacttcatcatgatgaactga

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