Coregonus clupeaformis (lake whitefish): 121577875
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Entry
121577875 CDS
T08357
Symbol
ogna
Name
(RefSeq) osteoglycin, paralog a isoform X1
KO
K08126
osteoglycin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121577875 (ogna)
Proteoglycans [BR:
cclu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
121577875 (ogna)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
121577875
NCBI-ProteinID:
XP_041747762
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Position
12:complement(14877734..14905503)
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AA seq
298 aa
AA seq
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MGTLRVVLLLSLIPSPWVLCSTGKHFNQDSTLTLEQQDVLFNRETYLEARRSKREAAALW
LGEDYDSSMVFLPADEPDDAPAEGVNALELPTCLLCVCLTGSVYCEEVVPEMSAVPTLPK
ETAYLYARYNKINKITNKDFAEIVTLKRIDLTGNLISEIEDGAFSKLTLLEELNLAENQL
VKLPMLPSKLTTFNANHNQLKTKGVKAKAFKKLEKLINLFLGDNALEAVPVIPESVRIVH
LQNNNITDISSDTFCKGNNTYYIRPNLKEVRLDGNPVLLSKHPDSFTCLKSLPVGQYR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggaactctgagagtggtgttactcctctccttgataccgtcaccatgggtgctctgc
tcgactgggaaacacttcaaccaggattcaacactcacactggaacaacaggatgtattg
ttcaatagagaaacctatctggaagcaaggaggtctaagagagaagcagcagccctgtgg
ctgggagaggactatgactccagcatggtcttcctgcctgctgatgaacctgacgatgcc
cccgctgagggggttaacgccttggagctgcccacatgcctgctgtgtgtgtgtctgacc
ggttcggtctactgtgaggaggttgttccagagatgagtgctgtgccgaccctgcccaag
gagaccgcctacctctacgcacgctacaacaagatcaacaagatcaccaataaagacttt
gcagaaatcgtgactctgaagagaatcgacctgacggggaacctgatctcggagatcgag
gacggagcattctctaagctgaccctgctggaggaactcaatttggctgagaaccaactg
gtgaagctgcccatgctgcccagcaagctcaccaccttcaacgccaaccacaaccagctc
aaaaccaaaggggtcaaggccaaagccttcaagaaactggagaagctgatcaacctgttc
ctgggagacaatgcactggaggccgtaccagtgatccctgagagcgtccgcattgtccac
cttcagaacaacaacatcacggatatcagctccgacacgttctgcaagggcaacaacact
tactacatcagaccaaacctgaaggaggtgaggctggacgggaacccagtgctgctgtct
aagcaccccgacagcttcacctgcctcaagtctctccccgtcggacagtaccgctaa
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