Coregonus clupeaformis (lake whitefish): 121577893
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Entry
121577893 CDS
T08357
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121577893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121577893
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121577893
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121577893
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121577893
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121577893
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PH_21
PH_11
BAR
ALA1
PH_8
PH_alsin
DASH_Spc19
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
121577893
NCBI-ProteinID:
XP_041747799
LinkDB
All DBs
Position
12:17082482..17211522
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AA seq
847 aa
AA seq
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MTVDFEECIKDSPRFRAGINEVETDVVEIEAKLDKLVKLCSGMIEAGRAYVSANKLFVNG
IKDLSQQCRKEEMISECLEKCGESLQEIVNYHMMLFDQAQRSIKQQLHTFIKEDVRKFKE
TKKQFDRVREDMEIAQVKNAQAPRNKPHEVEEATSSLTLTRKCFRHLALDYVLQINVLQA
KKKFEILDAMLSFMRAQYTLFQQGYNILDEIDPYMKKLAAELDQLVIDSAMEKRDLEHKH
ATIQQRTLMEDFSYDDNKVEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY
QKRLKDALTVVVEDLRLCSVKPCEDGERRFCFEVVSPTKSCMLQAESEKLRQAWIQAVQA
SIASAYRDISDNYYIERLDRTASPSTSSIDSASEPRGEKGGRGGEGRGESILHRVQSLPG
NELCCDCSQAAPCWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCEL
GNNVINHIYEGACEELGVKKPGPSSPRQEKEAWIKAKYVERRFLKKMRASDSLVEGERKS
RPWSVKKCQRHNGSMRGAPKTRRKYRHDPGLTSPGNLSAAAAAAKLRRDSLFCPDEMDNL
FSYFDTGNGTRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEVECESEEEESSGEVE
IEQEAGSDPEEPLPLQEPLPPGELLYRSSRLHNLPLMAEALAHGADVHSAKEEEGKTPLI
QAVAGGSLIACEFLLQNGADVNQRDMRGRGPLHHATYLGHTGQVCLFLKRGACQTEVDEE
GHDPLSMAVQAANADIVTLLRLARMNEEMREAEGPFGQPGQYPCSSPTEQQYRKCIQEFI
CLTIDYC
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggactttgaagaatgtattaaagactctccacgattcagggcgggcatcaat
gaggtggagacggatgtggtggagatcgaagctaaactagataagctggtgaagttatgt
agtggtatgatcgaggcgggcagggcgtacgtaagtgccaacaagctgtttgtcaacggc
atcaaagacctgtctcagcagtgcaggaaggaggaaatgatctctgagtgtctggagaag
tgtggggagagcctgcaggagatcgtcaactaccacatgatgctatttgaccaggcccag
aggtctatcaaacagcagctccacaccttcatcaaagaggacgtgcgtaagttcaaggag
actaagaagcagtttgaccgtgtgagggaggacatggagatagcccaggtgaagaacgcc
caggcccccaggaacaaacctcacgaggtggaggaggctacctcctctctcacgctgacc
cggaagtgcttcaggcacctggccttggactacgtactgcagatcaatgttcttcaggct
aagaagaagtttgagatccttgatgcaatgctgtcgttcatgcgtgcccagtacaccttg
tttcaacagggctataacatattggatgagattgatccctacatgaagaaactagctgca
gagctggatcagctagtcatagactcagccatggagaagagagacctggaacacaaacat
gctaccatacaacagaggactctgatggaggacttctcctacgatgataataaggtggag
ttcaacgtggacgctcctaacggtgtggtgatggaaggttacctgttcaagagggcctcc
aacgccttcaagacctggaacaggcggtggttctccatacagaacagccagctggtctac
cagaagagactcaaagatgccctgacggttgtggtggaggacctgaggctgtgttcagtc
aaaccctgcgaggatggagagaggaggttctgcttcgaggtggtgtcccccactaagagc
tgtatgcttcaggcagagtcagagaagttacgacaggcctggatccaagctgtacaggcc
tccatcgcctccgcatacagagacatatcagacaactactacatcgagcgtctggacagg
acagcctccccctctaccagcagcatagactcagccagcgagccccggggtgagaaaggg
gggagaggtggtgagggcaggggggagagcatcctccaccgggtgcagagcctgccgggt
aacgagctgtgttgcgactgctcccaggctgcaccctgctgggcctccatcaacctggga
gtcctgctctgcatcgagtgctccggcatacataggagtctgggggttcactgctccaag
gtgcggtcactaacactggactcctgggaaccagagctcctcaagttgatgtgtgagctg
ggtaacaacgtgatcaaccacatctatgagggagcctgcgaagagctgggagtgaagaaa
cctggaccctccagtcccaggcaagagaaggaggcgtggatcaaggctaaatatgtggag
aggcgtttcctgaagaagatgagagccagtgactcattggtggaaggtgagaggaagtcc
cgcccctggagcgtgaagaagtgccagcgccacaacggctccatgcgaggagcgcccaaa
acccgccggaaataccgccacgaccccggcttgacttcaccaggaaacctctccgcagct
gcagcagcagctaagcttcggcgtgactctctgttctgtcccgatgagatggacaacctc
ttctcctacttcgacaccggcaacggcacccgcagccctgcaggtctgagcagcgacagt
gggctgggaggcagtacagacgggagcacagacatcctggtgtttggctcagtggtcgac
agcgtcaccgaggaggtagagtgtgagtcagaagaggaggagtctagtggggaggtggag
atagagcaggaggcaggatcagaccctgaggagcccctgcccctgcaggagcccctcccc
ccaggggagttgctctaccggtcgtcacggctacacaacctgccactcatggccgaggcg
ttggcgcatggggcagatgtccactccgccaaggaagaggagggaaagaccccgctcata
caggccgtggcagggggctctctaattgcgtgtgagttcctgctgcagaatggggctgat
gtgaaccagagagacatgagggggagaggacccctccaccacgctacctacctgggacac
actggtcaggtgtgtctgttcctgaagagaggggcttgtcagacggaggtggatgaggaa
ggtcacgaccctctgagcatggctgtccaggccgctaacgccgatattgttacgctgttg
cggttagcacggatgaacgaggagatgcgcgaggcggagggtccattcggtcagccaggt
caatacccctgcagctcccccactgaacagcagtacaggaaatgtattcaggagtttatc
tgcctcaccatagactactgctag
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