Coregonus clupeaformis (lake whitefish): 121577919
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Entry
121577919 CDS
T08357
Name
(RefSeq) putative RNA-binding protein 15B
KO
K13190
RNA-binding protein 15
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121577919
03041 Spliceosome [BR:
cclu03041
]
121577919
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
121577919
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121577919
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121577919
NCBI-ProteinID:
XP_041747841
LinkDB
All DBs
Position
12
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AA seq
851 aa
AA seq
DB search
MKRQAGRDSSPSRALAKRIRERERERDGARREDLPPPPLALLLAESRRQNARSRSREREK
TRLREERGAAGDPLHHRQQHHDLSLIGRPPLRTTAALPKGKASTELLGPRGGAGGTLEYK
SLLISNLGSVLSDEHVEDGLFHEFKKFGDVSVKLSHTPELGRVAYVNFRHLEDAKEARHA
KTRLVLYDRPLKVEPMYVRRRSCTPPDVGYIPIHGAPYPPYRQRSLSPGAGVSSIRDIRP
LRHYPVEGLGLSRERERILDYYGMLDERGRPYGLPVPEHEDIKPEDDARACRNLFIGNLD
HNVTEGELRRGFDKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKIAMQGRVIGGN
PVKIGYGKANPTTRLWVGGLGPSNSLAALAREFDRFGSIRNIDYVKGDNFAYIQYESLDA
SQAACAQMRGFPLGGPERRLRVDFAKAEEPLPRSYPVGYQTPVPLPAHLDLVPEGYGGRH
RDCSLERELRTRDRSPPSHALFTQRERERALLDRDRGDREFTSPTKSLERRGGEAFGGSR
GGWGDRAARSRSRERWLKERDAARAGGERRRRHSLSLDRPSQEKERGRSKVRGGGPASPE
DSPDRARVRAPDSTTEPRGQSPDSSRHSNEDRGGGLKTGGDREKERDRDRNHRNASDNNH
TSSDTPNKDPRTLSTLSEYAATLAKAWHGHFALKNSCFPANMHLLEGGSGFFHSVMKDHQ
AKGKLTQLKIAQRLRMDQTRLDEVTRRIKQGGSEGYAVLLALQGPIDREAPPPEPGLQIR
LLRHLVTYLRNKEAAGVISLPVGGAKEGGKGGMLYAFPPCDFSQQFLQTARRTLGNLDEE
HLVVVIVNDSG
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgacaggccgggagggactccagtcctagtcgggctttagcgaaacgaatacgg
gaaagagagcgtgaacgagatggggcacggagagaggacctaccgcccccaccgcttgct
ttgctgctcgctgaaagccgaaggcaaaatgctcggagcaggagtagagaacgagaaaag
acgcggcttcgggaggagcgcggggccgctggagaccccctccaccaccgacaacaacac
cacgacctcagtctgatcggccgcccccctctccggactacagccgccctgcctaaaggc
aaagcgtcgaccgagctactgggcccccgggggggagcgggggggactctggaatacaaa
tcgttgctcattagcaatctaggctcggtactttctgacgaacatgttgaagacggactg
ttccacgagtttaaaaagttcggggacgttagtgtgaaactatctcacactccagagctg
ggccgggttgcctacgtgaatttccgtcacctggaggacgctaaagaggccaggcatgca
aagaccaggttagtgctgtatgatcgcccccttaaagtagagcccatgtacgttcgtcgt
cgcagctgcacaccgccggatgtgggctacattcccattcatggcgccccatatccccct
tatagacagaggtccctctcccccggggctggagttagcagtatcagagacatccgacca
ctgagacactaccctgtagagggtttgggactgagcagagagagggaaaggatcttagat
tactatgggatgttggatgagagggggcggccatacgggctgccagtacctgagcatgaa
gacataaagccagaggacgatgcgcgggcatgcaggaacctgttcattggcaaccttgat
cacaatgtcactgagggcgagctgaggagagggtttgacaagtacggcatcattgaggaa
gttgtgattaaacgtccggcgcgtggtcaggggggagcctacgctttcctcaagttccag
aacttagacatggctcaccgggccaagatagccatgcagggccgtgtgattggtgggaac
ccagtgaagatcggctatggtaaagctaaccccaccacgaggctctgggtaggtggcctc
ggccctagcaactccctagcagccctagcccgagagtttgaccgcttcggcagcatccga
aacatagactatgtgaaaggggacaattttgcctatattcagtatgaaagcttggatgcc
tcccaggccgcctgtgcccagatgagaggtttccccctgggaggcccagagcggaggctg
agggtggactttgccaaggcggaggagcccctgcctcgtagctacccagtggggtaccag
acccctgtgcccctgcctgcccacctggacctggtgccagaggggtacggcgggaggcac
cgcgactgcagcctggagagagagctccgtaccagggaccgctcaccaccctcccacgcc
ctgttcacccagcgggagagagagagggctctgctggacagggacaggggggacagagag
ttcaccagcccaaccaagagcctggagcgtagggggggtgaagcttttgggggatcccgt
ggagggtggggggaccgagcagcccggagccgcagccgagagcgctggttgaaggagagg
gatgctgcgcgggctgggggggagagacggagacgccacagcctctccctagacaggccc
tctcaggagaaggagagaggcaggtccaaggtgagaggaggaggaccagcctctccagag
gacagcccagacagagccagggtcagagccccagactccaccaccgagcccaggggacag
agccctgacagcagccgccactccaacgaggaccggggtggtggtctgaagaccggcggg
gacagggaaaaggaacgcgaccgtgaccgcaaccacagaaacgcgagcgacaacaaccac
acctcgtctgacacgcctaataaagaccccaggacactcagcacgctgtcggagtatgcc
gccaccctcgccaaagcctggcacggtcacttcgccctgaagaatagctgcttccccgct
aacatgcacctgctcgagggaggctctgggttcttccactctgtcatgaaggaccaccag
gcgaaggggaaactgacccagcttaagatcgcccagcgactgaggatggaccagaccagg
ctggacgaggtcaccaggaggatcaagcagggtgggtccgagggctacgctgttcttctg
gccctccagggcccaatcgaccgcgaggcccctccacctgaaccaggcctacagatcaga
ctcctccgtcacctggtcacctacctgaggaacaaggaggctgcaggggtgatcagtcta
ccggtaggcggggctaaggaggggggaaaggggggcatgctgtacgccttccccccctgt
gacttctcccagcagttcctccagaccgctcgcagaactttgggcaatctggatgaagaa
cacctggtggtagtgattgtcaatgactctggctaa
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