KEGG   Coregonus clupeaformis (lake whitefish): 121577919
Entry
121577919         CDS       T08357                                 
Name
(RefSeq) putative RNA-binding protein 15B
  KO
K13190  RNA-binding protein 15
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121577919
   03041 Spliceosome [BR:cclu03041]
    121577919
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    N6-methyltransferase complex
     121577919
Spliceosome [BR:cclu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    121577919
SSDB
Motif
Pfam: RRM_1 SPOC RRM_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 121577919
NCBI-ProteinID: XP_041747841
LinkDB
Position
12
AA seq 851 aa
MKRQAGRDSSPSRALAKRIRERERERDGARREDLPPPPLALLLAESRRQNARSRSREREK
TRLREERGAAGDPLHHRQQHHDLSLIGRPPLRTTAALPKGKASTELLGPRGGAGGTLEYK
SLLISNLGSVLSDEHVEDGLFHEFKKFGDVSVKLSHTPELGRVAYVNFRHLEDAKEARHA
KTRLVLYDRPLKVEPMYVRRRSCTPPDVGYIPIHGAPYPPYRQRSLSPGAGVSSIRDIRP
LRHYPVEGLGLSRERERILDYYGMLDERGRPYGLPVPEHEDIKPEDDARACRNLFIGNLD
HNVTEGELRRGFDKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKIAMQGRVIGGN
PVKIGYGKANPTTRLWVGGLGPSNSLAALAREFDRFGSIRNIDYVKGDNFAYIQYESLDA
SQAACAQMRGFPLGGPERRLRVDFAKAEEPLPRSYPVGYQTPVPLPAHLDLVPEGYGGRH
RDCSLERELRTRDRSPPSHALFTQRERERALLDRDRGDREFTSPTKSLERRGGEAFGGSR
GGWGDRAARSRSRERWLKERDAARAGGERRRRHSLSLDRPSQEKERGRSKVRGGGPASPE
DSPDRARVRAPDSTTEPRGQSPDSSRHSNEDRGGGLKTGGDREKERDRDRNHRNASDNNH
TSSDTPNKDPRTLSTLSEYAATLAKAWHGHFALKNSCFPANMHLLEGGSGFFHSVMKDHQ
AKGKLTQLKIAQRLRMDQTRLDEVTRRIKQGGSEGYAVLLALQGPIDREAPPPEPGLQIR
LLRHLVTYLRNKEAAGVISLPVGGAKEGGKGGMLYAFPPCDFSQQFLQTARRTLGNLDEE
HLVVVIVNDSG
NT seq 2556 nt   +upstreamnt  +downstreamnt
atgaaacgacaggccgggagggactccagtcctagtcgggctttagcgaaacgaatacgg
gaaagagagcgtgaacgagatggggcacggagagaggacctaccgcccccaccgcttgct
ttgctgctcgctgaaagccgaaggcaaaatgctcggagcaggagtagagaacgagaaaag
acgcggcttcgggaggagcgcggggccgctggagaccccctccaccaccgacaacaacac
cacgacctcagtctgatcggccgcccccctctccggactacagccgccctgcctaaaggc
aaagcgtcgaccgagctactgggcccccgggggggagcgggggggactctggaatacaaa
tcgttgctcattagcaatctaggctcggtactttctgacgaacatgttgaagacggactg
ttccacgagtttaaaaagttcggggacgttagtgtgaaactatctcacactccagagctg
ggccgggttgcctacgtgaatttccgtcacctggaggacgctaaagaggccaggcatgca
aagaccaggttagtgctgtatgatcgcccccttaaagtagagcccatgtacgttcgtcgt
cgcagctgcacaccgccggatgtgggctacattcccattcatggcgccccatatccccct
tatagacagaggtccctctcccccggggctggagttagcagtatcagagacatccgacca
ctgagacactaccctgtagagggtttgggactgagcagagagagggaaaggatcttagat
tactatgggatgttggatgagagggggcggccatacgggctgccagtacctgagcatgaa
gacataaagccagaggacgatgcgcgggcatgcaggaacctgttcattggcaaccttgat
cacaatgtcactgagggcgagctgaggagagggtttgacaagtacggcatcattgaggaa
gttgtgattaaacgtccggcgcgtggtcaggggggagcctacgctttcctcaagttccag
aacttagacatggctcaccgggccaagatagccatgcagggccgtgtgattggtgggaac
ccagtgaagatcggctatggtaaagctaaccccaccacgaggctctgggtaggtggcctc
ggccctagcaactccctagcagccctagcccgagagtttgaccgcttcggcagcatccga
aacatagactatgtgaaaggggacaattttgcctatattcagtatgaaagcttggatgcc
tcccaggccgcctgtgcccagatgagaggtttccccctgggaggcccagagcggaggctg
agggtggactttgccaaggcggaggagcccctgcctcgtagctacccagtggggtaccag
acccctgtgcccctgcctgcccacctggacctggtgccagaggggtacggcgggaggcac
cgcgactgcagcctggagagagagctccgtaccagggaccgctcaccaccctcccacgcc
ctgttcacccagcgggagagagagagggctctgctggacagggacaggggggacagagag
ttcaccagcccaaccaagagcctggagcgtagggggggtgaagcttttgggggatcccgt
ggagggtggggggaccgagcagcccggagccgcagccgagagcgctggttgaaggagagg
gatgctgcgcgggctgggggggagagacggagacgccacagcctctccctagacaggccc
tctcaggagaaggagagaggcaggtccaaggtgagaggaggaggaccagcctctccagag
gacagcccagacagagccagggtcagagccccagactccaccaccgagcccaggggacag
agccctgacagcagccgccactccaacgaggaccggggtggtggtctgaagaccggcggg
gacagggaaaaggaacgcgaccgtgaccgcaaccacagaaacgcgagcgacaacaaccac
acctcgtctgacacgcctaataaagaccccaggacactcagcacgctgtcggagtatgcc
gccaccctcgccaaagcctggcacggtcacttcgccctgaagaatagctgcttccccgct
aacatgcacctgctcgagggaggctctgggttcttccactctgtcatgaaggaccaccag
gcgaaggggaaactgacccagcttaagatcgcccagcgactgaggatggaccagaccagg
ctggacgaggtcaccaggaggatcaagcagggtgggtccgagggctacgctgttcttctg
gccctccagggcccaatcgaccgcgaggcccctccacctgaaccaggcctacagatcaga
ctcctccgtcacctggtcacctacctgaggaacaaggaggctgcaggggtgatcagtcta
ccggtaggcggggctaaggaggggggaaaggggggcatgctgtacgccttccccccctgt
gacttctcccagcagttcctccagaccgctcgcagaactttgggcaatctggatgaagaa
cacctggtggtagtgattgtcaatgactctggctaa

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