Coregonus clupeaformis (lake whitefish): 121577937
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Entry
121577937 CDS
T08357
Name
(RefSeq) TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121577937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121577937
03021 Transcription machinery [BR:
cclu03021
]
121577937
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
121577937
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121577937
RNA polymerase III system
TFIIIB
121577937
RNA polymerase I system
SL1/TIF-1B
121577937
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
121577937
NCBI-ProteinID:
XP_041747858
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All DBs
Position
1
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AA seq
296 aa
AA seq
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MEQNNSLPPFQGLASPQGAMTPGTPIFSPMMPYGSGLTPQPVTNTNSLSLLEEQHRQQQA
SAQQGGVSGGSGQTPQLYHSQTVTTTTLPGNTPLYTTTPLTPMTPITPATPASESSGIVP
QLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG
AKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSY
EPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKTT
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaacaacagtttgcctcctttccagggtcttgcctccccgcagggggcgatg
acgcctggaacgcccatcttcagccccatgatgccctatggcagtggtctgactccccaa
cctgtgacaaacaccaacagcctgtctctcctggaggagcagcatcggcaacagcaggct
tcggcccagcagggtggggtgtcagggggctcgggacagacaccacaactttatcactca
caaacggtcactaccaccacactgccgggaaacacccctctctacaccactacgccacta
acccccatgacacccatcacacctgcaacacctgcctctgagagctctgggattgtccca
cagctacagaacattgtatccactgtaaacttgggctgcaaacttgacttgaaaacaata
gcactgcgagctagaaatgctgagtacaatcctaagcgatttgctgctgtaatcatgaga
atacgagagccaagaacaactgcactaatcttcagctctgggaaaatggtgtgcacagga
gccaaaagtgaagagcagtcccgcctggcggccaggaaatatgccagagtcgtgcagaag
ttgggcttcccagccaaattccttgatttcaagattcagaacatggtgggcagctgtgat
gtcaaattccccattcggttagagggacttgtactaactcaccagcagttcagcagttat
gaaccagagttgttccctgggctaatctacagaatgatcaaacccagaattgtcctgttg
atatttgtttcaggcaaagttgtattaacaggtgcaaaggtgagaggagaaatttatgaa
gcatttgaaaacatctaccccatcttgaaaggattcaggaagacaacataa
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