KEGG   Coregonus clupeaformis (lake whitefish): 121577953
Entry
121577953         CDS       T08357                                 
Name
(RefSeq) integrin alpha-7 isoform X1
  KO
K06583  integrin alpha 7
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
cclu04810  Regulation of actin cytoskeleton
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121577953
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121577953
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121577953
   04810 Regulation of actin cytoskeleton
    121577953
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121577953
   04515 Cell adhesion molecules [BR:cclu04515]
    121577953
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121577953
Cell adhesion molecules [BR:cclu04515]
 Integrins
  Integrin alpha subunits
   121577953
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3
Other DBs
NCBI-GeneID: 121577953
NCBI-ProteinID: XP_041747883
LinkDB
Position
12:12932013..13000414
AA seq 1121 aa
MAPHLRHGVSVSLSQLPFLSLLLSLYFLTVAGFNLDTTMTLTKEGEAGSFFGFSLALHQQ
LTPEPHSWILVGAPRARGLGVMRRQRPGALYRCPITGEEFDCERVDIDGDVNLDQESKDN
QWLGVTVKSQGIGGKVVTCAHLYELRQRVSQPLETRDPIGRCYVLSEDLTERDDLDGGEW
KFCEGRPQGHEQFGFCQQGLSAAFTPDNQYIMFGAPGTYNWKGEMRVQLLNQTLLDLGFY
DDGPYEVADEKQLNAQLIPVPYHSYLGFSVDSAKGIMSRGELTFVAGAPRANHTGAVVLL
RKDNVYRLVPQHILWGEELASSFGYSVTTADLNSDGWTDLIVGAPNYFDRKADIGGAVYV
FLNPFGNWEYARPIRLNGTYDSMFGLTVNNVGDLDRDGYDDIAVGAPFDGDGKVFIYRGS
SSGIDTKPAQILDGVDEGVKRFGYSISGGLDIDGNLYPDLAVGSLGDKLVLYRSRPVIHV
IRDVSIEPQQYIDLEQHNCKGRDGVCVEVKACFTYTAYPETYSPDITLVLLIEADTERRK
LGLPHRVSFLGQSAQAAEYTHTDEVELKGQRHPACQSATFQLNENIRDKLRPISLAITHT
IRPPMFSSDTNPEERDTLPPVLSVATSNTLHSEVNFLREGCGDDKICQSNLKLTYQFGTR
PITSDLFTPLPRDDEEVAVFSLSDQRSVVLEVTVTNMPSDPLYPEEDGDDAHAAQLLVNL
PDTLSYSGFRGQQVVCQANQNGSQAECELGNPLKRDAILKFYIILSTSAITIETTELTVN
LLLATISEQRDLAPVIAVAKIIIELPLAVSGLARPHQLFFSGAVKGESAMETLDDVGSAV
EFEFMVTNTGPSLQTLGSAFLNIMWPHELSNGKWLLYPTSLHFHGHPETPCTPHTSLNPR
KFTHSSPSDDQPQAAGLKQARRKGRSHPEEEGHVMTKGSLGRTTPAVAASERRKSLKLDC
LLGSARCVLFQCPLYSFSGSAVLKIQGRLWNSTFLEEFQSVSALELLVRANITVKSSIKH
LVLRDAAAQVPVMIYPEIGLTAQYWIPWWWVLIAILAGILVLALLVCILWKCGFFRRVQY
EDKVPQYHAVKIPRQDRPQFQQKAGILQKKEWATHWSDGSS
NT seq 3366 nt   +upstreamnt  +downstreamnt
atggcaccacatctgagacatggagtctctgtctctctttcacagcttcctttcctttct
ctccttctctccctctatttcctgacggtcgcagggttcaacctggatactaccatgact
ctgaccaaggagggggaggctggcagcttttttggattctctctagcacttcaccagcaa
ctcacaccagaaccacacagttggatcctggtgggggctccgcgggccagaggactgggc
gtgatgcggaggcagcgccctggcgccctgtaccgctgtccaatcacaggcgaggagttt
gactgcgagcgcgtggacatcgatggagacgtaaacctcgaccaggaaagcaaggacaac
cagtggctaggagtgacagtcaagagccaggggattggaggaaaggtggtgacgtgtgcc
cacctgtacgagctacgtcagcgtgtgagccagccgttggagacgcgagaccccatcggg
cgttgctacgtgctcagtgaggacctgacagagagggacgatctggatggaggggagtgg
aagttctgtgaggggcgaccccagggacacgaacagtttggcttctgtcagcagggcctg
tctgccgccttcacacctgacaaccaatatatcatgttcggagctcctggaacatacaac
tggaaaggagagatgcgtgtccagctactaaaccagactctactggatctgggtttctat
gacgacgggccctatgaggtggcggatgagaaacagctgaatgctcagctgatccctgtt
ccctaccatagttacctgggcttctcagtggactctgctaagggcataatgagtcgtggc
gagctgacctttgtggcgggggctccgagagccaatcacacaggagcggtggtgctgctg
cgtaaagacaacgtgtaccgcctggtgccacagcacatcctgtggggagaggaactggct
tcttcctttggctactctgtgactacggctgatctcaacagtgacggctggacagacctg
atagtgggagctcctaactactttgacaggaaagcggatatcggaggtgctgtgtacgtc
ttcctcaacccattcggtaactgggagtatgctcgaccaatcaggctcaacggaacctat
gactccatgtttggattgaccgtcaacaatgtgggagacttggacagggacggatatgat
gacattgctgtgggggctccgttcgatggagatggcaaagtgttcatctaccgaggctca
tcctcaggcatcgacaccaagcctgcacagatcctggatggagtggacgagggggtgaag
aggtttggctactccatctcaggaggcctggacatcgatgggaacctgtaccctgacctg
gctgtaggctctctcggtgataagctagttctgtacaggtctcgcccagtcattcatgtg
atccgggacgtatccatcgaacctcagcagtatattgacttggagcaacacaactgcaag
gggagagatggagtttgtgtggaggtcaaagcctgcttcacctatactgcttatcctgag
acctactcaccagacatcactctggtcctactcattgaggctgacaccgagcgcaggaag
ctgggcctgccccaccgtgttagcttcctgggtcaaagtgcacaggcggcggagtacaca
cacactgacgaggtggagctgaagggtcaacgtcatcccgcctgccagagcgccaccttc
caactaaacgagaatatccgtgacaagctgcgtcccatctctctggccatcacccatacc
atcagaccccccatgttctcctcagacactaacccagaggaacgagacacgctacctcct
gtactgagtgttgccacctccaacaccctgcactctgaggtgaatttcctgagggaaggc
tgtggtgatgataagatctgtcagagcaacctgaagttgacctaccagtttggaacccga
cctatcacctctgacctcttcacccctctgccaagggacgatgaagaggtggcggtgttt
tctctgtctgaccagaggtctgtggtgttggaggtgaccgtcaccaacatgccctctgac
cctctgtacccagaggaagacggagatgatgcccacgccgcccagctactggtgaacctt
ccggacaccctgtcctactctggcttcaggggacaacaggtggtgtgccaggccaatcag
aatggctctcaggcagagtgcgagctgggaaaccccctgaagagagatgctatactgaag
ttctacatcatccttagcacctctgctatcaccatagagaccacggaactcactgtcaac
ctcctgctggctactatcagtgaacagcgagacctggccccagtcatagccgtggctaaa
atcatcatagagctccccctggctgtcagtgggctggccagaccccaccagctgttcttc
agtggggctgtgaagggggagagcgccatggagactctggacgatgtggggagtgctgtg
gagtttgagtttatggtgaccaacaccgggccgtccctgcagacgctaggctccgccttc
ctcaacatcatgtggcctcacgagctgtccaatgggaagtggctcctgtaccccacttct
ctccacttccatggccatccagaaacaccctgtaccccgcacacctccctcaacccacgc
aagttcacccacagctctccttctgacgaccagccacaggctgcaggcctgaagcaggcc
aggaggaaggggcggtcccacccagaagaggaagggcatgtgatgaccaagggcagtctg
ggtaggaccacgcctgctgtggccgcctcagagagacgcaagtcactcaaactggactgt
ctgctgggttcagcgcgctgtgtgctgttccagtgtcctctctacagcttctctggctca
gctgtcctcaagatccagggacgcctttggaacagcaccttcctggaggagttccaatca
gtcagtgctctggagctgctggttagagccaacatcacagtcaagtccagcatcaaacac
ctggtgctgagggatgctgccgcacaggtcccagtgatgatttacccagagattggtctg
actgcccagtactggatcccctggtggtgggtcctcatagccatcctggctggtatcctg
gtgctggctctgctggtctgcatcctctggaagtgtggtttcttccgtcgggtccagtat
gaagataaagtgcctcaataccatgcggtgaagatcccccgtcaagaccggccccagttc
cagcagaaggcagggatcctccagaagaaggagtgggccacacactggagcgatggaagc
tcctga

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