Coregonus clupeaformis (lake whitefish): 121577977
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Entry
121577977 CDS
T08357
Name
(RefSeq) ras-related protein Rab-4A isoform X1
KO
K07879
Ras-related protein Rab-4A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121577977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121577977
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cclu04031
]
121577977
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
121577977
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
121577977
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
ATP_bind_1
RsgA_GTPase
Gtr1_RagA
AAA_7
SLFN-g3_helicase
AAA_16
AAA_22
SRPRB
ATPase
ATPase_2
Septin
NACHT
Motif
Other DBs
NCBI-GeneID:
121577977
NCBI-ProteinID:
XP_041747937
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All DBs
Position
1:96328796..96334062
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AA seq
213 aa
AA seq
DB search
MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIINVVNKYVKLQ
IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG
NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDP
ERMGSGIQYGDAALRQLRSPRRGQAESAQECGC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagacatacgatttcctgttcaaattcctagtgattgggaatgcaggaactgga
aaatcatgtcttcttcaccagtttattgagaagaggttcaaagacgattctaatcacacc
atcggagtggagtttggctcaaagataatcaacgtagtgaacaaatatgtcaaactccaa
atctgggacactgcaggacaagagagattcagatctgtgacgcggagttactacagagga
gctgcaggagcgctgcttgtgtatgacatcaccagccgggaaacctacaacgccctgacc
aactggctgacagatgccaggatgctggccagccaaaatattgtcatcatcctgtgtggt
aacaagaaggacttggacgcagacagggaggtcaccttcctggaggcgtctcgctttgct
caggaaaatgagctgatgtttctggagaccagtgctctgacaggggagaatgtggaggag
gcctttgtgcagtgtgccaggaaaattctcaacaagatagagtcgggagagttggacccg
gagcggatgggatcagggatccagtacggagacgcggcgctgcgacagctgcgctcccct
cgcaggggacaggccgagagcgcccaggaatgtggctgttag
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