Coregonus clupeaformis (lake whitefish): 121578024
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Entry
121578024 CDS
T08357
Name
(RefSeq) eukaryotic translation initiation factor 4B isoform X1
KO
K03258
translation initiation factor 4B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121578024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121578024
03012 Translation factors [BR:
cclu03012
]
121578024
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121578024
mRNA cycle factors
Stress granule specific factors
121578024
Translation factors [BR:
cclu03012
]
Eukaryotic type
Initiation factors
eIF-4
121578024
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
121578024
NCBI-ProteinID:
XP_041747999
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All DBs
Position
12:23143210..23174367
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AA seq
650 aa
AA seq
DB search
MAAPAKKKGNKKGKTLTLTDFLAEDSGSGGNAPPPQPSYAKSTSWADETDDLEGDVSTSW
HSGEDSYRAPAIDRNILPTAPRSAREPNVDRSRLPRSPPYTAFLGNLPYDVSEESIMDFF
RGLAISAVRLPREPSNPERLKGFGYAEFDDVDSLLRALTLNEENLGNRRIRVDIADQSND
KEGRDNGQMGGRDRMGRMGDMGGPDKTDSDDWRARPTADADDGPPKREESAFGSRDRYGD
RDGPRRDNDRGFGGDRDRGFGGDRDGGRDRGFGGRDRYDDRGGESGAFGSRRDRDDGGRR
AFGSGYRRDDDGGGGGRYGDRDRDRYGGDREDRYERREERGGEGGPTQRPKLVLKPRSTP
KEEEQARSGGGGAVPAAPATAPSSGRASIFGAAKPVDTAAKEREVEEKLQRQLEEDKSRG
FDRKPRDRDRDPSWRSEEPPSERPATRSRTGSESSQTGSTSGGRVSRRRESERSVENEVF
SGKEDDPPSPGARPTSANSSTSSSKEPLKVMPAPPPKENAWAKRPAVSAGSTPVSPSDAA
PPKMSSSSADERGSGRDENKVDCVRRDRGPPRGRGGAAGPGAGRGRGEGANRDRRREEDR
KDNRRDRDSRPAPEPKKYEESPTPKFSSASKYAALLMDSEQGDDAEDSVE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccagctaagaagaaggggaataagaaggggaagacgctgaccctcactgac
ttcctggcagaggacagtgggagtggaggcaacgctccaccaccgcaacccagctacgcc
aagtcaaccagctgggccgatgagacggatgacctggagggagatgtatccacctcctgg
cactcaggggaggacagttaccgggccccggccatagaccgcaacatcctgcccacggcg
ccgcggtcggcccgcgagcccaacgtggaccggtcgcgccttccccgcagccccccctac
accgccttcctgggcaacctgccctacgacgtctcagaggaatctatcatggacttcttc
cggggcctagcgatcagtgctgtgcgcttgccacgggagcccagtaacccagagaggctg
aagggctttggctacgccgagtttgatgatgtggactccctcctgagggcactgactctc
aacgaggagaacctgggaaaccgcaggatccgggtggatattgcagatcagtccaatgac
aaggaggggagagacaatggccagatgggcggacgggacaggatgggccgtatgggagac
atggggggccccgacaagaccgacagtgatgactggagggcccggcccactgcagacgct
gacgacggacccccaaagagagaggaatccgctttcgggtcccgcgaccgctatggagac
cgtgacgggccgagacgggacaacgaccgcggctttggcggcgaccgagaccgcggcttt
ggcggcgaccgagacggcggcagagaccgtggcttcggcggcagagaccgttatgacgac
cggggaggtgagagcggagcctttggctcccgcagggaccgggatgacggcgggcgacgt
gccttcggcagtggctaccgccgtgatgatgacgggggtggtggtggccgctacggggac
cgggaccgggatcgctacggaggggacagagaggaccgatatgagaggcgcgaggagaga
ggaggtgagggtggtcctacccagaggcccaagctggtcctgaagccacgcagcacgccc
aaggaggaggagcaagctcgcagcggtggtgggggagctgttcctgctgctccagcgact
gcccccagctccggccgtgcctccatcttcggagcggccaagcccgtggacacggcggcc
aaggagcgggaggtggaggagaagctccagaggcagctggaagaggacaagtccaggggc
ttcgataggaaaccccgcgacagagacagggacccaagctggaggagtgaggaaccacct
tctgagcgacctgctacacgctcccgcacaggaagtgagtcatcacagacaggaagtaca
tctggaggaagagtctcgcgacgcagagagagcgagcgctcggttgagaatgaagtattc
agtggtaaggaggacgaccctccctctcccggggctcgccctacttccgccaactcttcc
acatcctcctccaaggagcctcttaaggtgatgcccgcaccaccacccaaggagaatgcc
tgggccaagcgccctgcggtgagcgcagggtccacccctgtctcccccagtgacgcggca
cctcccaaaatgagctcaagttctgcagatgaaagaggatctggaagggacgagaataaa
gtggactgtgtgcgtcgggaccggggccccccacgggggagagggggggctgcggggcct
ggagcagggcggggccgaggagaaggggccaacagagaccgacgaagggaggaagacaga
aaggataacagaagagaccgggactcaagaccagcaccagagccaaagaaatacgaagag
tcccccactcctaaattcagctcagccagtaaatacgccgctttgctaatggacagcgag
caaggagatgacgcggaggacagcgtagaataa
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