KEGG   Coregonus clupeaformis (lake whitefish): 121578038
Entry
121578038         CDS       T08357                                 
Name
(RefSeq) WD repeat-containing protein 1-like
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cclu04990]
    121578038
Domain-containing proteins not elsewhere classified [BR:cclu04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   121578038
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_HPS5 eIF2A Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_EIPR1 PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_NUP159_NUP214 NBCH_WD40 RMC1_N Beta-prop_RIG_1st Beta-prop_SCAP Beta-prop_DCAF4 PROPPIN DUF7165 Beta-prop_ELP1_1st Beta-prop_WDR11_1st WD40_RFWD3 DUF5711 Beta-prop_DCAF12 HPS3_N PQQ
Other DBs
NCBI-GeneID: 121578038
NCBI-ProteinID: XP_041748021
LinkDB
Position
12:complement(33915999..33935834)
AA seq 606 aa
MSYELKHVFASLPQMERGVAKVLGGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTEHPHQ
VTVAKYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRIACV
GEGREKFGAVFLWDTGSSVGEISGHSKIINSVDIKQTRPYRLITGSDDNCGAFFEGPPFK
FKFSSTDHSRFVNCVRFSPDGNRFCTAGADGQIFLYDGKTGEKIGALGGAKAHEGGVYAV
SWSPDSSQLISASGDKTVKLWDVGTSTALTTFNMGADVMDQQLGCLWQKDHLLSVSLSGY
INYLDKSNPDRPLRTIKGHSKSIQSLTVHKNEGRAYIYSGSHDGHINYWDAETGENDCFS
GKGHSNLVTKMVVDEADQLVTCSMDDTVRFTSMTKKEYSASNLVKMDIQPKHVSVATGGL
ALAVCIGQVVLLKDQKKVFTLDSLDYEPEAGAIHPGGSTVAVGGADGRVRLYSVQGNTLK
DEGKSVEAKGPVTDMAYSKDGAYLAVTDEKKVVTVFTVADDYSVKNDFYGHHAKVVTLAW
SPDNEHFASGGMDMMVYVWTVNDADKRLKIPDSHRLHHVSGLAWLDAHTLVTTSHDASIK
QWTLKF
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgtcctatgaattgaagcatgtatttgccagcctcccgcagatggaacgaggagtcgcc
aaagtccttggtggggatcccaaaggcaacaacttcctctacaccaatgggaagagtgtc
atcatcaggaacatagataaccctgccatagctgacatctacaccgagcaccctcatcaa
gttactgttgccaagtacgctcccagtggcttctatattgcatctggagatgtgtctggt
aagatccgtatctgggacactacccagaaggagcaccttctgaagtacgagtaccagcct
ttcggggggaaaatcaaggacattgcctggactgaggacagcaaaaggattgcttgtgtg
ggagagggacgtgagaagttcggggctgtgttcctgtgggacactggctcctcagtggga
gagatctcaggccactccaaaatcatcaacagtgtggacatcaagcagactcgcccctac
cgcctcatcaccggcagtgatgacaactgtggggccttcttcgagggaccgcctttcaag
ttcaagttctcaagcacagaccacagccggtttgtcaactgcgtgcgtttctctccagac
gggaaccgcttctgtacggctggcgctgatggtcagatcttcctatacgacggaaagacg
ggcgagaagattggggctctgggcggcgcgaaggcccacgaaggaggagtctatgccgtg
agctggagccctgatagctcccagctcatctctgcctcaggtgacaagactgtgaagctg
tgggacgtgggcaccagcacggccctcaccaccttcaacatgggcgccgacgtcatggac
cagcagctgggctgcctgtggcagaaggaccacctgctcagcgtctccctgtcgggctac
atcaactacctggacaagagcaaccccgaccggccactccgcaccatcaagggtcacagc
aaatccattcagtccttgacagttcacaaaaatgaggggcgggcttacatctactcgggc
agccatgacgggcacatcaattactgggatgcagagaccggggagaacgactgcttctca
gggaagggccacagcaacctggtcaccaagatggtggtggacgaggccgaccagctggtg
acctgcagcatggatgacacggttcgcttcacaagcatgaccaagaaagaatacagtgct
tctaacctggtaaagatggacatccagcctaaacatgtttccgtagcaacaggggggctc
gcattggctgtgtgcattggacaggtggtgttgctgaaggaccagaagaaggtgttcacg
ctggacagtctggactacgagccggaagcgggagccatccacccagggggcagcactgtg
gcagtgggtggggcagatgggagggtccgattgtattccgtccaaggcaatactctgaag
gatgaggggaagagcgtggaggccaaggggccagtcacagacatggcctactccaaagac
ggagcctacctggccgtcactgacgagaagaaggtcgtcacagttttcacagtggcggat
gattactcggtgaaaaatgatttttatggacaccacgcgaaagtagtcaccttggcctgg
tcgcccgacaacgaacactttgccagcggtgggatggacatgatggtctacgtttggaca
gtgaatgacgcagacaagaggctgaagatcccagactcccacaggttgcaccatgtcagt
ggcctggcctggctagatgcgcacactctagtgaccacctcccatgacgccagcatcaag
cagtggactcttaaattctga

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