KEGG   Coregonus clupeaformis (lake whitefish): 121578055
Entry
121578055         CDS       T08357                                 
Name
(RefSeq) ubiquitin-associated protein 2 isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121578055
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121578055
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    121578055
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121578055
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N UBA_8 Methyltransf_32
Other DBs
NCBI-GeneID: 121578055
NCBI-ProteinID: XP_041748066
LinkDB
Position
12:34510874..34538587
AA seq 1226 aa
MMTSLGGDKARGTRDKVLPAATHTTQPQKQLQATAEQIRLAQMIYDKNDADFEDKVNQLM
EVTGKNQDECMVALHDCNEDVNRAINFLLESTSDTTSWETVGKKKPLAKDGPAEGKENRE
KRGGEREGSRGRGSNRRGRGASNRSRQGERVRPEENGVEVGPVDRGSERGRRGGRGGRGE
CHLVALSHMFQSTLPVGSGGRGRGRVPAGSRFSAQGMGTFNPADYTTEQGTGTTQDDSWE
SGANNSTDGTVAWRSTLEDWAAEDWSEDLSETKVFTASSAPAPQNHITPGQSLNLASMLQ
KPVGGGEAPSSQSLVFTNSHHHPTHNGSAIGTGSTSYAHAALSSVLGAGFGDLGQSKRSQ
SSPGAQILEQLKGPGLGPLPSSQAAPPPSTQGASSTSLGSRLPGLGVAPPVLPPPSTSSW
DNKAPEPSTTTSSLTSHFSREFRLQPEPSLVLSHLAQRHSAPSLPLVCQSSPPPAQSPSP
SQGPPLAAIGAKPAPSAGPDPQGSSSLQQHRIPQLKAQKRRIPPTSKIPLSAVEMPGSAD
IPGLNVQFGALDFGSEAALPDFGPVETCVSVASRESTRAPAPQSQTNLYSKPLSESMGIP
LSVPLPLSSSEPIYHFPSVAMPSLAPSSMGTVSSSTPSSSISSSVPSSSTSPFVSLGSGY
DCGPVAPHSRLAFSQSKEAPGPIMNGLNGVRTSAMDTSSASSTPESPSPSISTSSAPAPS
ALMPSSIPPQSSALPSLPHDMPSASLATQNSHGSSSHSSALGSSSLTYTSVESSVSSLAP
SSGAYSSGHAMAQSLHQAPAQSLHQAPAQSLHQVNSSMAHIMGTMSHMNSMVSSMGGTSG
LHANQALGLSANGTTAQSNLCSAPRTAPLLSSSTGKAPPNLSQGGPPLLPNQYIMGPGGL
LPAYPQIYGYEDLHMLQSRLPMPSLQDYYGITFPGPTALSGRDGNLANNPYSGEVTKFGR
GDSTSPAPPSSLSAQQQPQQGQPQAQTQPPQPQGQPQPQGHHSSQQQQAFLPPGYSYTGL
PYYPGMPGAAFQYGHTMFMPQGQGPAKQHGVGLGNPSASPFQQQPSGYGQHTFSSGYEDL
TQGQAGVDYSKGYSNSSQSQAKSAATGAGKGGISVTSGNTGIPEISGSVYNKTQSFDKQG
FHAGTPPPFNLPSALGGPGGAPGGYAPAPFLHILQPAHQQPHSQMLHHHLAQDGQGGPSQ
RGQSSSMQQKSQVNKSSYGSSPYWGN
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgatgacctcgttgggcggcgacaaagcccggggcactcgggacaaagtgctgcctgct
gccacccacacaactcaaccacagaaacagctccaggcgaccgcagagcagatccggctc
gcccagatgatctatgacaagaatgatgctgattttgaggacaaagtgaaccagctgatg
gaggtgacgggaaagaaccaggacgagtgcatggtagcgctccacgactgcaatgaggat
gtcaacagagccatcaacttcctccttgagagcacctctgacacgacctcgtgggagaca
gtggggaaaaagaaacccctagcgaaggacggcccggcggagggcaaggagaaccgggag
aagagaggaggagagagggagggcagcaggggccggggaagcaaccggagaggcaggggt
gccagcaaccgcagccgccagggggagagagtgcggccagaggagaatggtgtggaagtg
ggccctgtggacagagggtcagagcgaggccgcagggggggaagagggggtagaggtgag
tgtcatttagtggcactttctcatatgttccagtcaacactcccagtcggatctggaggc
agaggaaggggcagggtgccagctggaagcaggttttcagcccagggaatggggaccttt
aacccagcagactacaccacagaacagggaacagggaccacacaagatgactcctgggag
tcaggggccaacaacagcacagacgggacagtggcctggaggagtactctggaggactgg
gctgctgaggactggagcgaggatctctctgagaccaaagtgttcactgcttcaagtgca
cctgcacctcagaaccacatcacacctgggcaaagtctgaacctggcctctatgctgcag
aagccagtgggaggaggagaggctccctcctctcagagcctggtcttcaccaactcccac
catcaccccacccacaacgggtcagccatcggcacaggcagtaccagctacgcacatgcc
gccctgtcgtcagtgctgggggcaggttttggggacctgggtcagtctaagaggagtcag
tccagtccgggggcccagatcttggagcagctgaagggcccaggcctgggtcctctccct
tcctcccaggcagccccccctcccagcacacagggggccagcagcacctctctggggagt
agactcccagggttaggagtagcacccccggtcctccctccaccttccacttccagctgg
gacaacaaggcccctgagcccagcaccaccacctcctcactcacctcccacttcagccgg
gagtttaggctgcagcctgagccatccctggtgctgagccatctggcccagagacacagc
gccccctccctgcccctggtgtgccagtccagccccccgccagcccaatccccatccccc
agccagggaccccccctggccgccatcggtgccaagcctgcccccagcgcagggccggac
cctcagggcagcagctcgctgcagcagcaccgcattccgcagctaaaggctcagaaacga
aggatacctcccacctccaagatccccttgtcggcggtggaaatgcctggctctgccgac
atccccggtctaaacgttcagttcggagcgctggactttggctcggaggcagccctgccg
gactttggccctgtggagacatgcgtcagcgtggcctccagggagtccaccagggccccc
gccccacagagccagaccaacctctactccaaacccctcagtgaatctatgggcatccct
ctctccgttcccctccctctgtcctcctctgagcccatctaccacttcccgtcggtggcc
atgcccagcctcgccccctcctctatgggtacggtcagctcctccactccctcctcctcc
atctcttcctcggtgccctcctcctccacatctcccttcgtctcactgggaagcggttat
gactgtgggcctgtggcccctcactcacgcctggccttctcccagagcaaagaggccccc
ggaccaatcatgaacggtctgaacggtgtgaggacgtctgctatggacacttcatcagcc
tcctccacgccagagtctccctctccgagcatcagtaccagcagtgctcctgccccctct
gccctcatgccctcctccatacccccccaaagctcagcacttcccagtctgccacatgac
atgccctctgccagcctggcaacacagaacagccatggcagcagtagtcattcctcagca
cttggctccagctctctcacttacaccagtgtggagagtagtgtgagctctctggcgccc
tcgtctggcgcctactcatctggtcatgccatggcccagtcgctccaccaggccccggcc
cagtcgctccaccaggcccccgcccagtcgctgcaccaggtcaacagcagcatggctcac
atcatgggcaccatgagccacatgaacagtatggtcagtagcatgggtggcaccagcggg
ctacacgccaaccaagcactggggctcagcgccaacggaaccacagcccaatcgaacctc
tgctcggcccccaggaccgcaccgctgctctcctcctcaactggtaaagctcctcctaac
ctgtcccagggagggcccccactactgcccaaccagtacatcatgggcccaggaggcctg
ctgcctgcctacccgcagatctatggctatgaggacctccacatgctacagtccagactg
cctatgccctctttgcaggattattacggaatcacattccctggccccacagcactctct
ggcagagatgggaacctcgccaataacccctactcaggtgaagtcacaaagtttggcagg
ggtgactccacctcccctgcaccccccagcagcttgtcagcccaacagcagccccaacaa
ggccagccccaggcccagactcaacccccccagcctcaaggccagccccagcctcagggc
caccacagcagccagcagcagcaggccttcctcccgccgggctacagctacacgggcctg
ccctactatcccgggatgcctggtgctgccttccagtacggccacaccatgttcatgccc
cagggacaagggccagccaagcagcatggtgtgggtctgggcaacccctcagcaagcccc
ttccagcagcagcccagcggctacggccagcacactttcagctcagggtatgaggacctg
acccagggccaagcaggagtggactacagcaaaggctacagcaactcctcccagagccag
gccaaatctgctgctacaggtgctggtaaaggcggcatctctgtgacatcaggcaacacc
gggatcccagaaatcagtggcagtgtttacaacaagacccagtcctttgataagcaaggt
ttccatgcggggactccccctcccttcaacctgccctcagctctggggggtcctggaggg
gccccggggggctatgctcctgcccccttcctccacatcctgcagcctgcccaccagcaa
ccccactcccagatgctgcaccatcacctggctcaggacggacagggcggtcctagccag
cgaggccagtctagcagcatgcagcagaagagccaggtgaacaagtccagctacggcagc
tccccatactggggcaactga

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