Coregonus clupeaformis (lake whitefish): 121578083
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Entry
121578083 CDS
T08357
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48-like isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121578083
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121578083
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121578083
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121578083
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121578083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
121578083
NCBI-ProteinID:
XP_041748111
LinkDB
All DBs
Position
12:complement(25446102..25462025)
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AA seq
1049 aa
AA seq
DB search
MAPRVQLEKAAWRWVESVRPEDIQREHIEIAYRICVPACKRGACRRNCKGNPNCLVGVGE
HAWLGEINENSFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRTLYLC
QNARAEEHNMDSDYEPRNICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKNPNLQNVIQQQFCGQMSYVTVCNQCGRASPLPSRYYELELNIQG
HKNLTECVTEFLKEEKLDGDNRYFCESCQSKQNATRRIKLHSLPRILNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMGPFLEGKDEKCVYELSAVLIHRGVSAYSGHYIAHVRDARTSD
WYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYTCQREED
TDPMETNVEVPGFLQRLVDRDNRKFEEWCLEMADMRKQSVDKGKAKHEEVKELYELLPAE
DGQQYEFVPLEWLKKWLDDSTVTKEIDNGNFLCSHGKLHPDKVGEAKRISVKAAELLFDR
YGGGPRLDGSTLCEECVGQRCRVLRLKNQLAEDYKEVTCLVKGPPKSDEGYWVGKTSLRS
WRQLALEQLEEDEEETKHSDGKTNGEGPEITATKEYGPENQDDEEMKNFNEDILCRHGGL
SILESERRLVTVEVWSKLRVYFPKAPQFTQLQEPCQQCLRLEREGKENEALNRMMASEQK
SSLLNLFQEKNRPTLTKWPQETDILYIVPLFFVDEWRKFIRRPTKTSPVSSVGNSLLLCP
HEGFMFTHDSMLKGDAQHIALLWPGEWEVISRHFLVDQPISICRISEATPNGSSVEYTTQ
PELCRDCREGFIFQQQRDMREYAQATVYVRKVIDDKRIMKEAAPEMNVSGSEAEDEREEP
VAKVDGEQDPDFSQSEDGAKRQRLGEGTIGAAASPAPMASCGKSGIRRSTRHRKLRGEKA
LIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLADDSATLGSLGVIPESVICLKADE
PIADYAAMDDVYQVCMPEEGFKGTGLLGH
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgcgtacagcttgagaaagcagcctggcgctgggtcgagtcggtgagaccg
gaggacatacaacgagaacatattgagatagcttaccgaatctgtgtaccggcgtgcaag
aggggagcatgcaggaggaattgtaaagggaacccaaattgtcttgtcggtgttggggaa
catgcctggttgggggagatcaatgagaacagcttccacaacattgacgatccaaattca
gagcgccgggacaagaacacgtttgtgggtctgacgaacctgggcgccacgtgttacgtc
aacaccttcctgcaggtgtggttccacaacctggagctgcgcaggaccctgtacctgtgt
cagaacgcccgggcagaggagcacaacatggactcagactacgagcctcgcaacatatgt
gaacacctgcagtacctgtttgcactgctgcagaacagcaacagaaggtacattgacccc
tcggggctggtcaaggcgctaggactggacacaggacaacagcaggatgctcaagagttc
tccaagctcttcctttcgctattggaggacacattatccaaacagaagaacccaaacctg
cagaatgtcattcagcaacagttctgtggacaaatgtcttacgtcactgtgtgtaaccag
tgtggccgtgcttctcccctgccgtcccgatactacgaactagagctcaacatccagggc
cacaagaaccttacggaatgtgtcacagagttcctcaaggaggagaagctggatggtgac
aaccgctacttctgtgagagctgccagagcaaacagaacgccactcgacgcatcaaactg
cacagcctcccacgcatactaaacctgcagctcatgcgttttgtctttgacagacaaacg
ggtcacaagaagaagctcaacaccttcatcagttttccagagcagctggacatgggccca
tttctggagggcaaagatgaaaagtgtgtgtacgagctgagtgcagtcctgatccaccgc
ggggtcagtgcctactcgggtcactacatcgcccacgtgcgagacgcccgcaccagtgac
tggtacaagttcaacgacgaggagattgagaagatggagggcaagaagctacagctgggc
atcgaagaggacatcgccgagacggtgaagtcccagacccgtaagcccaagtgcagtaaa
ggataccactgttccaggaacgcctacatgctggtgtacacgtgccagagagaggaggac
actgaccccatggagaccaacgttgaggtgccaggctttctgcagaggctggtggaccga
gacaacaggaagtttgaggagtggtgcctggagatggccgacatgcgcaagcagagcgtc
gacaagggcaaggccaagcacgaagaggtgaaggaactctacgagcttttacctgcggaa
gacggccagcagtatgagtttgtgcctctggagtggctgaagaaatggctggacgactcg
acggtcaccaaagaaatcgacaacggcaacttcctgtgttctcatggtaaactgcacccc
gacaaggtgggggaggccaagaggatctccgtcaaagcagcagagcttctctttgacaga
tacggaggaggacccagactggatgggtcaactctctgtgaagaatgtgtgggccagaga
tgcagggtgctgcggctaaagaaccagctggccgaggactacaaagaagtcacctgcctt
gttaagggcccgcccaaaagtgatgaggggtactgggtgggcaagacgtctcttcggagc
tggagacagctggccttggagcagctggaggaggacgaggaggagaccaaacacagcgac
ggcaaaaccaacggagagggaccagagatcactgctactaaagagtacggcccagagaac
caggatgacgaggagatgaagaacttcaacgaggacatcctctgtcggcatggcggtctt
agtatcctggagagtgagaggcggctggtgactgtggaagtgtggtccaaactgagggtg
tacttccccaaagccccccagttcacccagctacaggagccatgtcagcagtgcctgagg
ctggagcgtgagggcaaagagaatgaggctctgaacaggatgatggcgtcagaacagaag
agctccctcctgaacctgttccaggagaagaacagacccacactcaccaagtggccacag
gagacggacattctctacatagttcctctgttttttgtggacgagtggagaaagttcatc
aggaggcccactaagacctccccagtgtctagtgtggggaacagtttgctcctttgtccc
catgaaggcttcatgttcacccacgattccatgttgaagggagacgcccaacatatagct
cttctctggcccggcgaatgggaggtgatcagcagacacttcctggttgatcagccaatc
tccatctgccggatcagtgaggccacgcccaacggctccagtgtggagtacaccacccag
cctgagctttgcagggactgcagagaaggcttcatcttccagcagcagagggacatgaga
gagtacgcacaagccacagtctacgtccgcaaggtcatagacgacaagaggataatgaag
gaggcagctcctgagatgaatgtgagtgggtcggaggcagaggatgagagggaggagcct
gttgctaaggtggacggagagcaagaccctgactttagccagtcagaggacggggcgaag
cgtcagaggctgggtgagggcaccatcggtgctgccgcaagtccggcccccatggccagt
tgcggcaaatcaggtatcaggaggagcacgaggcacaggaagctccggggagagaaagca
ctcatcgtctcagccaatcagacactcaaggagcttaaaatacagatcatgcatgccttc
tccgtggccccgtttgatcagaacctgtcgatcgacggccggtgtctagcggacgactct
gccaccctcggcagcctaggagtcatcccagagagcgtcatctgtctgaaggctgatgaa
cccatagcagattatgcagcaatggatgatgtttatcaggtctgtatgcctgaagaagga
tttaaaggtactgggcttcttggtcactga
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