KEGG   Coregonus clupeaformis (lake whitefish): 121578147
Entry
121578147         CDS       T08357                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 11A isoform X1
  KO
K22415  zinc finger CCCH domain-containing protein 11
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121578147
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     121578147
SSDB
Motif
Pfam: zf-CCCH_3
Other DBs
NCBI-GeneID: 121578147
NCBI-ProteinID: XP_041748230
LinkDB
Position
12:27493939..27509281
AA seq 880 aa
MTNHRDDCYFFYYSNCAKGDRCPFRHCDAAKGSEVVCSLWQESRCFRQVCKFRHMEIKKN
RKEMACYWENQPAGCQKPHCAFHHEKPRFIDGKYVPPNKSFALKEEEEPHEDPLPPVPAS
IPANPQLRGVIKAETQENVPSPTHPPVVINPADDDEDEDDQFSEGEDCRYGSDRSRVVSP
RKMAVASSSDDSLNFGVRTLEEIRLRKALKASMRIAGYPVPGQGSDQRNNGVSSEKENMK
SFIRPSPFTAKDDTVVFGEETGRRNVVERIVKEVPAGGDLPMKRRLAERLGRNMEEDEMD
LPPRKALKPVRDRLGLPVEPTAASESAESNSKTRASEVIRIKTLEEIRQEKLAKTQAQGQ
GDDHRPSVPDSTATKAPKRSAAVKSAAGLHVKTTFEILHAKRKLEEDQGPSLRKAKQPAV
EAAPGNSQGPPEPVMLMRVAPPGGRVKVKTLEEIRREKAARMQALGQEAFNMKIPGSDPA
SGEGGAKKSCILRINKPASAASTTTQKTSEVTEKKPAEPAAVATEATPANGSSVNVKTFE
EIMHEKRLRKQQLQKEQASSTSHSEGSVKAESTHKQAAGPAPQRENRARVSPSAAPSPPT
ITLEAPAQAPKALLRQRITLKPKAASPQQGSPLMQAEPDSPSLSPRSSSAAPGKRERGSP
GGSSPPKQAALAAAASPRPSGEEAPVEKAQDGAQKKSPGQATEAKVRPKLNVRPSVIKPG
QKRREAERSAVAAVKPLNCTSTAQEEPQQELPCKWREVSSPSSRMQAQISLMVPRSPPTT
LGLGCSSSPLREEFQAVPVKQHSPAITTAAPDTCIVPQSPLVKTPTQPKARRPTASTSAM
DEFDELMNEFTDDRLEDDLELDPGKGEDDYLLELSEMIDS
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgactaaccatagagatgactgctatttcttctactactccaactgtgctaaaggtgac
cgctgccccttcagacactgtgatgccgccaagggcagtgaggttgtctgcagcctgtgg
caggagagccgctgcttccgacaggtctgcaagttccgccacatggaaattaagaaaaac
aggaaggagatggcatgttactgggagaaccagcctgctggctgccagaagcctcactgt
gcgttccaccatgagaaaccacgcttcatagatggcaaatacgtaccgcccaacaaaagt
tttgccctgaaagaggaagaggagcctcatgaggatcctttgcctcctgtccctgcctcc
atcccagccaacccccagctccgtggggtcattaaggcggagacacaggagaacgttccc
agccctacccacccgcctgtggtcatcaatccggcagatgatgatgaggatgaagatgat
cagttctcagagggggaggactgcaggtacggctcagacagatccagagtggtctctccc
aggaagatggctgtggcctccagctcagatgactcgctgaactttggtgtcagaaccttg
gaggagatcagactgaggaaagccctgaaagccagtatgaggatagctggttatccagtt
cctggccagggctcagaccagagaaacaacggagtgagcagcgagaaggagaacatgaaa
tcctttatccgaccatctcccttcacagctaaggatgacactgtggtgtttggtgaagag
actgggagacgcaacgtcgtggagagaatagtcaaagaagttcctgctggtggtgacctg
ccaatgaaacgccgtctggccgagcgcctcgggaggaacatggaggaggatgaaatggac
ctgccccctcggaaagctctgaaacctgtcagggacagactgggattacctgttgaaccc
actgctgcatctgaatcagctgagagcaacagcaagactagagcgtctgaagtaatccgc
atcaaaaccctggaggagatcaggcaggagaagttggccaagacccaggctcagggtcag
ggggacgaccatcgcccttcagtccctgattccaccgctaccaaggccccaaagagaagc
gccgctgtcaaatctgcagctggccttcacgtgaagaccacctttgagatcctccacgcc
aagaggaagctggaggaggaccaggggcccagcctcaggaaggccaagcagccggctgtg
gaagcagctccagggaactcccagggacccccagagccagtcatgctcatgcgggtggcc
cctcctgggggaagagttaaggtgaagaccctggaggaaatccgcagggagaaggcagcc
aggatgcaggccctgggacaggaggcatttaacatgaagatcccaggctccgacccggcc
tccggagagggaggtgccaagaagtcctgcatactgcgcatcaacaaaccagcttctgct
gccagcactaccacccagaagacatccgaggtgaccgagaagaagccagctgagcctgct
gctgttgctactgaggccacccctgctaatggtagcagcgtgaatgtgaagaccttcgag
gagatcatgcatgagaagaggctccgcaagcaacagctgcagaaggagcaggcctcgtcc
accagccactcagagggctccgtcaaggctgaatctacccataaacaggccgcaggcccc
gccccccagagggagaacagggcgagggtgagcccctctgccgccccctcaccccccacc
atcaccctggaggcacctgcccaggcgcccaaggccctccttcgccagcgcatcacgctc
aaacccaaggcagcctccccccagcaggggtctccactgatgcaggccgagccagactcc
ccctccctcagccccaggagctccagcgctgccccaggcaaaagggagagaggctcccca
ggaggttccagtccccccaagcaggctgccttagcagcagctgcctcccctaggccctcc
ggggaagaggctccagttgagaaggctcaggatggagctcagaagaaatcccctgggcaa
gctactgaagctaaagtgaggcccaagctgaacgtgaggccttctgtgataaagccaggc
cagaaaaggagagaagcagaaagatctgctgttgctgcagtcaaacccctcaactgcacc
tccacagcacaggaagagccacagcaggagctgccctgcaaatggagagaggtgtcctct
ccctcctccagaatgcaggcccaaataagcctgatggttcccaggagtccccccaccacc
ctgggcctgggctgcagctccagtcccctgagagaggagttccaggcggtccctgtcaaa
cagcacagcccagccatcaccacagcagccccagacacctgcatagtcccacagagtcct
ttggtgaagacgcccacccagcccaaggctcggcggcccaccgctagcacctccgccatg
gacgaatttgacgaactgatgaatgagtttacagatgaccgtctggaagatgacttggag
ctggaccccggcaagggagaggatgactacctgctggagctgtctgagatgattgacagc
taa

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