Coregonus clupeaformis (lake whitefish): 121578149
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Entry
121578149 CDS
T08357
Name
(RefSeq) prolargin
KO
K08125
prolargin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121578149
Proteoglycans [BR:
cclu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
121578149
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
DUF3420
Motif
Other DBs
NCBI-GeneID:
121578149
NCBI-ProteinID:
XP_041748235
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Position
12:complement(27565892..27577603)
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AA seq
380 aa
AA seq
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MKAGVGLYSALVLCLLMGAVFSQRPRPKKPPKPPKATKRPSFKPDPPPDELEPQEPTDFP
PPILGPPSMFPDCPRECFCPPSFPNALYCENRNLRTVPVIPSRVHYLYLQNNYISVVTAE
PFNNATELRWVDMANNRIKKVDKQVFEKVPGLLFLYMDRNQLKEVPHDLPAGLEQLRLSH
NQISKIPSGAFGKMEHLALLDLHHNKLSDSDMGKNTFKDLKNLVQLNLAHNILKKMPANI
PNGITQLFLDRNNIDDIPKDYFQGFSNLAFVRLNYNQLSDKGVPKAVFNVSTLLDLHLAH
NQLTSVPLFNPQLEHLHLNHNSIESINGTQLCPFSLSSESLTDEALMPRLRYLRLDGNHL
SPPVPLDIIMCFRHLKSIVI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggtgtgggactctactctgccctggtgctctgtctcctgatgggggcagtg
ttctcccagagaccacgacctaagaaacctcctaagcctcctaaggccaccaagcgcccc
tccttcaagcctgacccgccacctgatgaactggaaccccaggagcccacagacttcccc
cctcccatccttggccccccctccatgttccctgactgtccccgtgagtgtttctgcccc
ccctccttccccaacgccctctattgtgagaaccggaacctccgtacagtcccagtgatc
ccgtcgagagtccactacctttacctgcagaacaactacatctctgtggtaacagcggaa
cccttcaacaacgccaccgagctgcgatgggttgacatggccaacaaccgcataaaaaaa
gtggacaagcaggtgtttgagaaggtacccggtctgctgtttctctacatggataggaac
cagttgaaggaggttcctcatgacctgccagctgggttggagcagctcagactcagccac
aaccagatctccaagatcccctctggagctttcggcaagatggagcacctcgctctgctt
gacctgcaccacaacaagttgagtgacagtgacatggggaagaacacttttaaagacctg
aagaacctggttcagctgaacttggcccacaacatcctgaagaagatgccagctaacatc
cccaacggcatcacacaactattcctggacaggaacaacatcgacgacatccctaaggac
tacttccaaggcttctccaacctggcgtttgtgaggctcaactacaaccagctaagtgat
aagggagtacctaaggctgtgttcaacgtttccaccctgctagatcttcacctggcccac
aaccagctcacctccgtccccctgttcaacccccagctggagcacctgcatctcaaccac
aacagcattgagagtattaacgggacccagctgtgtccgttcagtctgtcctctgagagt
ctgactgatgaggctcttatgcccagactcaggtacctgcgtctggatgggaaccatctg
agtcctcctgtccctctggacatcatcatgtgtttcagacacctcaagtctatcgtcatc
tag
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