Coregonus clupeaformis (lake whitefish): 121578152
Help
Entry
121578152 CDS
T08357
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
KO
K14793
ribosomal RNA-processing protein 9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121578152
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
90S particles
Other 90S particles
121578152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
WD_LRWD1
Beta-prop_WDR19_1st
WDR54
WD40_like
Beta-prop_BBS7
LAIKA
Motif
Other DBs
NCBI-GeneID:
121578152
NCBI-ProteinID:
XP_041748238
LinkDB
All DBs
Position
12:complement(27968740..27976062)
Genome browser
AA seq
482 aa
AA seq
DB search
MSFFIKKKGPPKVFKKSENSAGSKRKNDGDTGNKLKKKLNSKHNEEISSDSETEGPAVHR
KRRANVEEEFDETPQEKKLRLAKLYLDQLRDEEEKKAEEESFETDLIAGRLQEEVLEQKG
KLQRMVAKDLLPPDTSEIRMLRGHKLPVTCLVISPDDKHVFSAAKDCSIIKWDVENGKRL
HTIAGGRKGTEDRHVGHTAHVLCMSISSDGKYLATGDINKLIMIWEAATCKHLYKFTGHR
GPVSGLSFRRGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDVITGLDSGSRERCVTAG
GRDRTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKKPLSTV
KAAHGRHGDVGLEQPYWVAAVAALQNSDTVASGSHNSKVQLWKCGQGFRHLEPLFSIPVT
GFVNSLKFSSSGKFLVAGVGQEHRLGRWWRLKEAKNGLYIIPLKRQQPEQEEVQNGDENG
CS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctttataaagaaaaaaggacctccaaaggttttcaaaaagagcgagaattca
gccggttcaaaacgaaagaatgatggagacacgggaaacaaactcaagaagaagctcaat
tcaaagcacaatgaagaaatctccagcgactctgaaacagaaggccctgcagtgcacaga
aaaaggagggccaatgtcgaagaagagtttgatgagactccacaggaaaagaaactacga
ttagccaaactctaccttgaccaattgagggatgaggaagaaaagaaggcagaggaagag
tcttttgagactgacctgatagctggaagacttcaagaagaagtgcttgagcagaaagga
aagcttcaacggatggttgcaaaagatctcctgccaccagacacatcagagattcgtatg
ttgcgaggccacaagctgccagtcacctgtctggtcatctctcctgatgacaagcatgtc
ttctccgctgccaaagactgctccatcatcaaatgggatgtagagaatggtaagagactg
cacacaatagctggtgggaggaaaggaacagaggatcgccatgttggacatacagcccat
gtcctgtgtatgtccatatcatcggacggcaagtacctggcaacgggtgacattaataag
ttgatcatgatttgggaggcagcaacatgtaaacacctgtacaagttcacaggacataga
ggccctgtgtcgggcctgtccttcaggaggggcacccatgacctgtacagtgcctctcac
gaccgctccatcaaggtgtggaacgtggacgaaaacgcctatgtggaaaccctatttggt
caccaggatgtgatcacggggctggacagtgggagtcgggagcgctgtgtgactgcaggg
gggagggaccgcactgtgagggtgtggaagattgctgaggagtcccagctagtgttccat
ggccatgagggctccatcgactgtatccagctcattaatgaagaacacatgataacaggc
gctgatgatggctccgtctccctctggagtgtgaacaagaagaagcccctcagcacggtg
aaggcagcccatgggcggcatggcgacgtggggctggagcagccctactgggtggcagcc
gtggcagctctgcagaactctgacactgtagcctcaggttcacacaactctaaggtgcag
ctatggaagtgtggccaggggttccgtcacctggagcctctcttcagcatccctgtgact
ggttttgtcaacagtctgaagttctccagctctggaaagttcctggtggcaggagtggga
caggagcacaggcttggtcggtggtggagactgaaggaagcgaagaacggactctatatt
attcctctgaaaagacaacagccagagcaggaagaggtccagaatggagacgagaatggg
tgtagctga
DBGET
integrated database retrieval system
