Coregonus clupeaformis (lake whitefish): 121578174
Help
Entry
121578174 CDS
T08357
Name
(RefSeq) serine/arginine-rich splicing factor 3
KO
K12892
serine/arginine-rich splicing factor 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121578174
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121578174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121578174
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
SR proteins
121578174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
121578174
NCBI-ProteinID:
XP_041748272
LinkDB
All DBs
Position
12:29697962..29703186
Genome browser
AA seq
172 aa
AA seq
DB search
MGEPAHLRDCPLDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLCGCRVRVELSNGEKRSRSRGPPPSWSRRPGREDYSSRRRGSPPVR
RRSPRRRSFSRSRSRSLSRDRRRERSISRDRNHKPSRSFSRSRSRSRTAERK
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacctgctcatctcagagattgtcctctggattgcaaggtgtatgttgggaac
ttgggaaacagtggaaacaagactgagttggagagggcgtttgggtactatggcccactg
cggagtgtgtgggtggccaggaaccccccaggctttgcctttgtcgaatttgaggatccc
agagatgcaaccgatgctgtgagagaactggatggacggacgctgtgtggctgcagagtg
agagttgagttgtctaatggggagaaacgctcgaggagccgtggacctcccccctcctgg
agccgtcgccctggacgtgaagactacagcagcaggcgccgtgggagcccgcctgtcaga
cgccgctctcctaggaggaggagcttcagccgcagtcgcagcaggtctctgtcaagagac
agaagaagagagaggtctatctccagagacaggaaccataaaccttcaagatccttctca
aggtcccggagccgctccaggaccgctgagagaaagtga
DBGET
integrated database retrieval system
